RNA–Protein interactions for RNA: ENSMUST00000195975.4

Pdlim5-206, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,845 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-206ENSMUST00000195975 Arhgap33Q80YF9 1305 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Shank3Q4ACU6 1730 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Gm21663A0A0G2JE01 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Gm7361D3Z6R1 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 5031410I06RikE9Q4E0 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Gm1979E9QAN3 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Gm5862K7N5V5 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Gm10220K7N660 267 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Sall2Q9QX96 1004 aa16.84■□□□□ 0.29
Pdlim5-206ENSMUST00000195975 Afg3l2Q8JZQ2 802 aaKnown RBP16.83■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Phkg2Q9DB30 406 aa16.83■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Vars2Q3U2A8 1060 aa16.82■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Fchsd2Q3USJ8 740 aa16.82■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 ApobrQ8VBT6 942 aa16.82■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Apba2P98084 750 aa16.81■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Slc5a1Q8C3K6 665 aa16.81■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Pdzd9Q9D9M4 266 aa16.81■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Tjp1P39447 1745 aaKnown RBP16.81■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Aox2Q5SGK3 1345 aa16.81■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Chmp7Q8R1T1 451 aa16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Iqcf3Q9D498 203 aa16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Cabp2Q9JLK4 216 aa16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Erbb3Q61526 1339 aa16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Ccnl1Q52KE7 532 aaKnown RBP16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 TmpoQ61033 693 aaKnown RBP16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Asic4Q7TNS7 539 aa16.8■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Mapk8ip3Q9ESN9 1337 aa16.79■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 OscarQ8VBT3 265 aa16.79■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Snapc4Q8BP86 1333 aa16.79■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Rps6ka4Q9Z2B9 773 aa16.78■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Mrs2Q5NCE8 434 aa16.77■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Ssfa2Q922B9 1252 aa16.77■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Kdm2bQ6P1G2 1309 aa16.77■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Crb1Q8VHS2 1405 aa16.77■□□□□ 0.28
Pdlim5-206ENSMUST00000195975 Zscan21Q07231 555 aa16.77■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Q4VA45 678 aa16.77■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Sos2Q02384 1333 aa16.77■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Ubr2Q6WKZ8 1755 aa16.77■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 VirmaA2AIV2 1811 aaKnown RBP16.77■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Q8BT18 775 aa16.76■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Cypt1Q8CH20 168 aa16.76■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Klc3Q91W40 508 aa16.76■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Apaf1O88879 1249 aa16.75■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Pim2Q62070 370 aa16.75■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Ciz1Q8VEH2 845 aa16.75■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Golga2Q921M4 999 aa16.74■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Ildr2B5TVM2 661 aa16.73■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Snap23O09044 210 aa16.73■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Znf541Q0GGX2 1363 aa16.73■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Myo5bP21271 1818 aa16.73■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Ints5Q8CHT3 1018 aa16.73■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Kiaa0319lQ8K135 1048 aa16.72■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Abcc12Q80WJ6 1366 aa16.71■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Rtf1A2AQ19 715 aaKnown RBP16.71■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Map4k4P97820 1233 aaKnown RBP16.71■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Ankrd13dQ6PD24 605 aa16.71■□□□□ 0.27
Pdlim5-206ENSMUST00000195975 Esx1O88933 382 aa16.7■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Hdac6Q9Z2V5 1149 aa16.7■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Nkx2-3P97334 362 aa16.7■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Ccdc155Q80VJ8 648 aa16.7■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Sos1Q62245 1319 aa16.69■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Ezh2Q61188 746 aaKnown RBP16.68■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Cavin4A2AMM0 362 aa16.68■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 NrdcQ8BHG1 1161 aa16.67■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Tiam2Q6ZPF3 1715 aa16.67■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Atg3Q9CPX6 314 aa16.66■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Usp19Q3UJD6 1360 aa16.66■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Hmgb2P30681 210 aaKnown RBP16.66■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Jmjd4Q8BFT6 427 aa16.65■□□□□ 0.26
Pdlim5-206ENSMUST00000195975 Bicdl1A0JNT9 577 aa16.64■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Slc4a2P13808 1237 aaKnown RBP16.64■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Stra8P70278 393 aa16.63■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Swt1Q9DBQ9 907 aa16.63■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Uhrf1bp1B2KF50 1429 aa16.63■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 AceP09470 1312 aa16.63■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Cap2Q9CYT6 476 aa16.63■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Efcab2Q9CQ46 164 aa16.62■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Dusp27Q148W8 1138 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Uspl1Q3ULM6 1089 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Smg7Q5RJH6 1138 aaKnown RBP16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Btbd11Q6GQW0 1109 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Dcaf5Q80T85 946 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Kndc1Q0KK55 1742 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Nav1Q8CH77 1875 aa16.61■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Supt5hO55201 1082 aaKnown RBP16.6■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Ggnbp2Q5SV77 696 aa16.59■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Igsf1Q7TQA1 1317 aa16.59■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Ccdc85cE9Q6B2 420 aa16.59■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Prim1P20664 417 aa16.59■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Fam198bQ3UPI1 517 aa16.59■□□□□ 0.25
Pdlim5-206ENSMUST00000195975 Kif23E9Q5G3 953 aa16.57■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 CoblQ5NBX1 1337 aaKnown RBP16.57■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Ric1Q69ZJ7 1422 aa16.57■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 C4bP01029 1738 aa16.57■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Smarcc1P97496 1104 aa16.56■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Irx6Q9ER75 438 aa16.56■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 CrbnQ8C7D2 445 aa16.56■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Mak16Q8BGS0 296 aaKnown RBP16.55■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Adcy9P51830 1353 aa16.55■□□□□ 0.24
Pdlim5-206ENSMUST00000195975 Miga2Q8BK03 593 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms