RNA–Protein interactions for RNA: ENSMUST00000195975.4

Pdlim5-206, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,845 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-206ENSMUST00000195975 Gm35339A0A140LHH9 1649 aa28.63■■■□□ 2.17
Pdlim5-206ENSMUST00000195975 NischQ80TM9 1593 aa28.27■■■□□ 2.12
Pdlim5-206ENSMUST00000195975 Abcc9P70170 1546 aa27.38■■□□□ 1.97
Pdlim5-206ENSMUST00000195975 Abcc8B2RUS7 1588 aa27.27■■□□□ 1.96
Pdlim5-206ENSMUST00000195975 ScribQ80U72 1612 aa26.26■■□□□ 1.79
Pdlim5-206ENSMUST00000195975 Kdm5dQ62240 1548 aa25.41■■□□□ 1.66
Pdlim5-206ENSMUST00000195975 NacadQ5SWP3 1504 aa25.41■■□□□ 1.66
Pdlim5-206ENSMUST00000195975 Dcaf1Q80TR8 1506 aa25.13■■□□□ 1.61
Pdlim5-206ENSMUST00000195975 Sycp2Q9CUU3 1500 aa24.91■■□□□ 1.58
Pdlim5-206ENSMUST00000195975 Rb1cc1Q9ESK9 1588 aa24.68■■□□□ 1.54
Pdlim5-206ENSMUST00000195975 BicraF8VPZ9 1578 aa24.56■■□□□ 1.52
Pdlim5-206ENSMUST00000195975 Rhox8Q6VSS7 320 aa24.52■■□□□ 1.52
Pdlim5-206ENSMUST00000195975 Ccdc180J3QNE4 1664 aa24.38■■□□□ 1.49
Pdlim5-206ENSMUST00000195975 Baz1aO88379 1555 aa24.32■■□□□ 1.48
Pdlim5-206ENSMUST00000195975 Crybg2B7ZCC2 1516 aa24.15■■□□□ 1.46
Pdlim5-206ENSMUST00000195975 Zcchc6Q5BLK4 1491 aaKnown RBP23.93■■□□□ 1.42
Pdlim5-206ENSMUST00000195975 Pds5bQ4VA53 1446 aaKnown RBP23.81■■□□□ 1.4
Pdlim5-206ENSMUST00000195975 Smarca2Q6DIC0 1577 aa23.63■■□□□ 1.37
Pdlim5-206ENSMUST00000195975 Thoc2B1AZI6 1594 aaKnown RBP23.61■■□□□ 1.37
Pdlim5-206ENSMUST00000195975 Atad2bE9Q166 1460 aaKnown RBP23.61■■□□□ 1.37
Pdlim5-206ENSMUST00000195975 Dnajc5bQ9CQ94 199 aa23.59■■□□□ 1.37
Pdlim5-206ENSMUST00000195975 Smarca4Q3TKT4 1613 aaKnown RBP23.52■■□□□ 1.36
Pdlim5-206ENSMUST00000195975 Rtl1Q7M732 1744 aa23.48■■□□□ 1.35
Pdlim5-206ENSMUST00000195975 Cecr2E9Q2Z1 1453 aa23.46■■□□□ 1.35
Pdlim5-206ENSMUST00000195975 Iqgap2Q3UQ44 1575 aa23.38■■□□□ 1.33
Pdlim5-206ENSMUST00000195975 Ercc6F8VPZ5 1481 aa23.35■■□□□ 1.33
Pdlim5-206ENSMUST00000195975 Cc2d2aQ8CFW7 1633 aa23.24■■□□□ 1.31
Pdlim5-206ENSMUST00000195975 Wdr62Q3U3T8 1523 aa23.15■■□□□ 1.3
Pdlim5-206ENSMUST00000195975 Fam135aQ6NS59 1506 aa23.09■■□□□ 1.29
Pdlim5-206ENSMUST00000195975 Frmpd1A2AKB4 1549 aa23.08■■□□□ 1.29
Pdlim5-206ENSMUST00000195975 Cttnbp2B9EJA2 1648 aa22.99■■□□□ 1.27
Pdlim5-206ENSMUST00000195975 Synj1Q8CHC4 1574 aa22.96■■□□□ 1.27
Pdlim5-206ENSMUST00000195975 CftrP26361 1476 aa22.95■■□□□ 1.26
Pdlim5-206ENSMUST00000195975 Brd4Q9ESU6 1400 aaKnown RBP22.93■■□□□ 1.26
Pdlim5-206ENSMUST00000195975 Ccdc136Q3TVA9 1136 aa22.91■■□□□ 1.26
Pdlim5-206ENSMUST00000195975 Phldb1Q6PDH0 1371 aaKnown RBP22.9■■□□□ 1.26
Pdlim5-206ENSMUST00000195975 Unc13aQ4KUS2 1712 aa22.88■■□□□ 1.25
Pdlim5-206ENSMUST00000195975 Baz1bQ9Z277 1479 aa22.79■■□□□ 1.24
Pdlim5-206ENSMUST00000195975 Ubl4bQ9CQ84 188 aa22.66■■□□□ 1.22
Pdlim5-206ENSMUST00000195975 Trim41Q5NCC3 630 aa22.55■■□□□ 1.2
Pdlim5-206ENSMUST00000195975 Esf1Q3V1V3 845 aaKnown RBP22.54■■□□□ 1.2
Pdlim5-206ENSMUST00000195975 Mrc2Q64449 1479 aa22.54■■□□□ 1.2
Pdlim5-206ENSMUST00000195975 Rsf1E9PWW9 1441 aaKnown RBP22.35■■□□□ 1.17
Pdlim5-206ENSMUST00000195975 Kif15Q6P9L6 1387 aa22.3■■□□□ 1.16
Pdlim5-206ENSMUST00000195975 Lamc3Q9R0B6 1581 aa22.28■■□□□ 1.16
Pdlim5-206ENSMUST00000195975 Cux2P70298 1426 aa22.25■■□□□ 1.15
Pdlim5-206ENSMUST00000195975 Top2bQ64511 1612 aa22.19■■□□□ 1.14
Pdlim5-206ENSMUST00000195975 Golga3P55937 1487 aa22.18■■□□□ 1.14
Pdlim5-206ENSMUST00000195975 Kif21aQ9QXL2 1672 aa22.13■■□□□ 1.13
Pdlim5-206ENSMUST00000195975 TnnQ80Z71 1560 aa22.1■■□□□ 1.13
Pdlim5-206ENSMUST00000195975 Lrriq1Q0P5X1 1673 aa22.09■■□□□ 1.13
Pdlim5-206ENSMUST00000195975 Cngb1E1AZ71 1325 aa22.08■■□□□ 1.13
Pdlim5-206ENSMUST00000195975 Npm1Q61937 292 aaKnown RBP22■■□□□ 1.11
Pdlim5-206ENSMUST00000195975 Cep164Q5DU05 1446 aa21.97■■□□□ 1.11
Pdlim5-206ENSMUST00000195975 Ccdc18Q640L5 1455 aa21.93■■□□□ 1.1
Pdlim5-206ENSMUST00000195975 Fmn1Q05860 1466 aa21.92■■□□□ 1.1
Pdlim5-206ENSMUST00000195975 Camsap1A2AHC3 1581 aa21.92■■□□□ 1.1
Pdlim5-206ENSMUST00000195975 Il27Q8K3I6 234 aa21.85■■□□□ 1.09
Pdlim5-206ENSMUST00000195975 Dhx29Q6PGC1 1365 aaKnown RBP21.79■■□□□ 1.08
Pdlim5-206ENSMUST00000195975 Eif4g3Q80XI3 1579 aaKnown RBP21.77■■□□□ 1.08
Pdlim5-206ENSMUST00000195975 LrpprcQ6PB66 1392 aaKnown RBP21.77■■□□□ 1.08
Pdlim5-206ENSMUST00000195975 Crocc2F6XLV1 1638 aa21.76■■□□□ 1.07
Pdlim5-206ENSMUST00000195975 Urb2E9Q7L1 1524 aaKnown RBP21.73■■□□□ 1.07
Pdlim5-206ENSMUST00000195975 Plb1Q3TTY0 1478 aa21.7■■□□□ 1.06
Pdlim5-206ENSMUST00000195975 PogzQ8BZH4 1409 aaKnown RBP21.67■■□□□ 1.06
Pdlim5-206ENSMUST00000195975 Ccdc88bQ4QRL3 1481 aa21.62■■□□□ 1.05
Pdlim5-206ENSMUST00000195975 Grin2bQ01097 1482 aa21.6■■□□□ 1.05
Pdlim5-206ENSMUST00000195975 Duox2A2AQ99 1517 aa21.58■■□□□ 1.04
Pdlim5-206ENSMUST00000195975 Top2aQ01320 1528 aaKnown RBP21.54■■□□□ 1.04
Pdlim5-206ENSMUST00000195975 Ift140E9PY46 1464 aa21.53■■□□□ 1.04
Pdlim5-206ENSMUST00000195975 Samd9lQ69Z37 1561 aa21.46■■□□□ 1.03
Pdlim5-206ENSMUST00000195975 Rusc2Q80U22 1514 aa21.46■■□□□ 1.03
Pdlim5-206ENSMUST00000195975 Chic1Q8CBW7 227 aa21.44■■□□□ 1.02
Pdlim5-206ENSMUST00000195975 Efcab5A0JP43 1406 aa21.41■■□□□ 1.02
Pdlim5-206ENSMUST00000195975 NrkQ9R0G8 1455 aa21.38■■□□□ 1.01
Pdlim5-206ENSMUST00000195975 Pbrm1Q8BSQ9 1634 aaKnown RBP21.38■■□□□ 1.01
Pdlim5-206ENSMUST00000195975 Disp1Q3TDN0 1521 aa21.38■■□□□ 1.01
Pdlim5-206ENSMUST00000195975 Shroom2A2ALU4 1481 aa21.36■■□□□ 1.01
Pdlim5-206ENSMUST00000195975 Setd1bQ8CFT2 1985 aa21.35■■□□□ 1.01
Pdlim5-206ENSMUST00000195975 Shroom4Q1W617 1475 aa21.31■■□□□ 1
Pdlim5-206ENSMUST00000195975 Nup160Q9Z0W3 1402 aaKnown RBP21.29■■□□□ 1
Pdlim5-206ENSMUST00000195975 Rad54l2Q99NG0 1466 aa21.27■■□□□ 1
Pdlim5-206ENSMUST00000195975 PtprkP35822 1457 aa21.26■□□□□ 0.99
Pdlim5-206ENSMUST00000195975 Cc2d2bA0A286YDU8 1405 aa21.24■□□□□ 0.99
Pdlim5-206ENSMUST00000195975 Magi3Q9EQJ9 1476 aa21.22■□□□□ 0.99
Pdlim5-206ENSMUST00000195975 Grin2aP35436 1464 aa21.22■□□□□ 0.99
Pdlim5-206ENSMUST00000195975 Dnajc5P60904 198 aa21.2■□□□□ 0.98
Pdlim5-206ENSMUST00000195975 SynmQ70IV5 1561 aa21.18■□□□□ 0.98
Pdlim5-206ENSMUST00000195975 AqrQ8CFQ3 1481 aaKnown RBP21.14■□□□□ 0.97
Pdlim5-206ENSMUST00000195975 Pabpn1Q8CCS6 302 aaKnown RBP21.13■□□□□ 0.97
Pdlim5-206ENSMUST00000195975 Gpatch8A2A6A1 1505 aa21.13■□□□□ 0.97
Pdlim5-206ENSMUST00000195975 Pla2r1Q62028 1487 aa21.11■□□□□ 0.97
Pdlim5-206ENSMUST00000195975 HrcG5E8J6 738 aa21.11■□□□□ 0.97
Pdlim5-206ENSMUST00000195975 Zeb1Q64318 1117 aa21.08■□□□□ 0.96
Pdlim5-206ENSMUST00000195975 Pelp1Q9DBD5 1123 aaKnown RBP21.06■□□□□ 0.96
Pdlim5-206ENSMUST00000195975 Npm2Q80W85 207 aa21.04■□□□□ 0.96
Pdlim5-206ENSMUST00000195975 Col17a1Q07563 1470 aa21.02■□□□□ 0.96
Pdlim5-206ENSMUST00000195975 Mroh2bQ7M6Y6 1581 aa21.02■□□□□ 0.95
Pdlim5-206ENSMUST00000195975 Fgd6Q69ZL1 1399 aa20.98■□□□□ 0.95
Pdlim5-206ENSMUST00000195975 Gab3Q8BSM5 595 aa20.95■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms