RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Larp1Q6ZQ58 1072 aaKnown RBP26.12■■□□□ 1.77
Lig3-209ENSMUST00000173009 Aox2Q5SGK3 1345 aa26.11■■□□□ 1.77
Lig3-209ENSMUST00000173009 Nup153E9Q3G8 1462 aaKnown RBP26.11■■□□□ 1.77
Lig3-209ENSMUST00000173009 Elp1Q7TT37 1333 aaKnown RBP26.11■■□□□ 1.77
Lig3-209ENSMUST00000173009 Rtf1A2AQ19 715 aaKnown RBP26.1■■□□□ 1.77
Lig3-209ENSMUST00000173009 Pdzd9Q9D9M4 266 aa26.1■■□□□ 1.77
Lig3-209ENSMUST00000173009 Mst1rQ62190 1378 aa26.1■■□□□ 1.77
Lig3-209ENSMUST00000173009 Phkg2Q9DB30 406 aa26.1■■□□□ 1.77
Lig3-209ENSMUST00000173009 Tnks1bp1P58871 1720 aa26.08■■□□□ 1.77
Lig3-209ENSMUST00000173009 Eif3bQ8JZQ9 803 aaKnown RBP26.08■■□□□ 1.77
Lig3-209ENSMUST00000173009 Tns2Q8CGB6 1400 aa26.08■■□□□ 1.77
Lig3-209ENSMUST00000173009 Uhrf1bp1B2KF50 1429 aa26.07■■□□□ 1.76
Lig3-209ENSMUST00000173009 Atxn3Q9CVD2 355 aa26.07■■□□□ 1.76
Lig3-209ENSMUST00000173009 Ofd1Q80Z25 1017 aa26.06■■□□□ 1.76
Lig3-209ENSMUST00000173009 Trpm3Q5F4S9 1721 aa26.06■■□□□ 1.76
Lig3-209ENSMUST00000173009 Zfp444Q3TDV8 331 aaKnown RBP26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Ralbp1Q62172 648 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Ncbp3Q8BZR9 615 aaKnown RBP26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Nwd2Q6P5U7 1742 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Gm21663A0A0G2JE01 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Gm7361D3Z6R1 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 5031410I06RikE9Q4E0 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Gm1979E9QAN3 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Gm5862K7N5V5 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Gm10220K7N660 267 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Asic4Q7TNS7 539 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Taok3Q8BYC6 898 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Chmp7Q8R1T1 451 aa26.05■■□□□ 1.76
Lig3-209ENSMUST00000173009 Nkx2-3P97334 362 aa26.03■■□□□ 1.76
Lig3-209ENSMUST00000173009 4930523C07RikE9Q2T4 99 aa26.02■■□□□ 1.76
Lig3-209ENSMUST00000173009 GapdhsQ64467 440 aa26.01■■□□□ 1.75
Lig3-209ENSMUST00000173009 Slc5a1Q8C3K6 665 aa26.01■■□□□ 1.75
Lig3-209ENSMUST00000173009 Ssfa2Q922B9 1252 aa26.01■■□□□ 1.75
Lig3-209ENSMUST00000173009 MpndQ3TV65 487 aa26■■□□□ 1.75
Lig3-209ENSMUST00000173009 Sos1Q62245 1319 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 Ubap1lG3UW59 384 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 Ggnbp2Q5SV77 696 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 Ccdc30Q8BVF4 654 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 Sugp2Q8CH09 1067 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 GakQ99KY4 1305 aa25.98■■□□□ 1.75
Lig3-209ENSMUST00000173009 Prim1P20664 417 aa25.97■■□□□ 1.75
Lig3-209ENSMUST00000173009 Ccdc155Q80VJ8 648 aa25.97■■□□□ 1.75
Lig3-209ENSMUST00000173009 ApobrQ8VBT6 942 aa25.97■■□□□ 1.75
Lig3-209ENSMUST00000173009 Senp3Q9EP97 568 aaKnown RBP25.97■■□□□ 1.75
Lig3-209ENSMUST00000173009 Abcc12Q80WJ6 1366 aa25.96■■□□□ 1.75
Lig3-209ENSMUST00000173009 Bsdc1Q80Y55 427 aa25.95■■□□□ 1.74
Lig3-209ENSMUST00000173009 Ccnl1Q52KE7 532 aaKnown RBP25.92■■□□□ 1.74
Lig3-209ENSMUST00000173009 Kiaa0319Q5SZV5 1081 aa25.92■■□□□ 1.74
Lig3-209ENSMUST00000173009 Ints5Q8CHT3 1018 aa25.92■■□□□ 1.74
Lig3-209ENSMUST00000173009 Klhdc4Q921I2 584 aa25.92■■□□□ 1.74
Lig3-209ENSMUST00000173009 Gas2l2Q5SSG4 860 aa25.91■■□□□ 1.74
Lig3-209ENSMUST00000173009 Zcrb1Q9CZ96 217 aaKnown RBP25.91■■□□□ 1.74
Lig3-209ENSMUST00000173009 Gnai1B2RSH2 354 aa25.9■■□□□ 1.74
Lig3-209ENSMUST00000173009 Gnai3Q9DC51 354 aa25.9■■□□□ 1.74
Lig3-209ENSMUST00000173009 U2surpQ6NV83 1029 aaKnown RBP25.89■■□□□ 1.73
Lig3-209ENSMUST00000173009 Ppp6r1Q7TSI3 856 aa25.89■■□□□ 1.73
Lig3-209ENSMUST00000173009 Lrit1Q8K099 624 aa25.89■■□□□ 1.73
Lig3-209ENSMUST00000173009 Cdc37l1Q9CZP7 335 aa25.89■■□□□ 1.73
Lig3-209ENSMUST00000173009 Btbd11Q6GQW0 1109 aa25.88■■□□□ 1.73
Lig3-209ENSMUST00000173009 Ppfibp2O35711 882 aa25.87■■□□□ 1.73
Lig3-209ENSMUST00000173009 Ksr2Q3UVC0 959 aa25.87■■□□□ 1.73
Lig3-209ENSMUST00000173009 Rbm25B2RY56 838 aaKnown RBP25.86■■□□□ 1.73
Lig3-209ENSMUST00000173009 Pibf1E9Q6K3 756 aa25.85■■□□□ 1.73
Lig3-209ENSMUST00000173009 Usp16Q99LG0 825 aa25.85■■□□□ 1.73
Lig3-209ENSMUST00000173009 Irx6Q9ER75 438 aa25.85■■□□□ 1.73
Lig3-209ENSMUST00000173009 Ttc21aQ8C0S4 1314 aa25.85■■□□□ 1.73
Lig3-209ENSMUST00000173009 Crb1Q8VHS2 1405 aa25.84■■□□□ 1.73
Lig3-209ENSMUST00000173009 Ankrd50F7BE84 1390 aa25.83■■□□□ 1.73
Lig3-209ENSMUST00000173009 1700019A02RikA0A087WPV9 146 aa25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 Foxp4Q9DBY0 795 aaKnown RBP25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 Ly75Q60767 1723 aa25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 PappaQ8R4K8 1624 aa25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 Pnpla7A2AJ88 1352 aa25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 GalcP54818 684 aa25.82■■□□□ 1.72
Lig3-209ENSMUST00000173009 Anks4bQ8K3X6 423 aa25.81■■□□□ 1.72
Lig3-209ENSMUST00000173009 Hdac6Q9Z2V5 1149 aa25.81■■□□□ 1.72
Lig3-209ENSMUST00000173009 NudcO35685 332 aaKnown RBP25.79■■□□□ 1.72
Lig3-209ENSMUST00000173009 Rps6ka4Q9Z2B9 773 aa25.79■■□□□ 1.72
Lig3-209ENSMUST00000173009 Afg3l2Q8JZQ2 802 aaKnown RBP25.79■■□□□ 1.72
Lig3-209ENSMUST00000173009 Trim26Q99PN3 545 aa25.79■■□□□ 1.72
Lig3-209ENSMUST00000173009 Znf710Q3U288 666 aa25.78■■□□□ 1.72
Lig3-209ENSMUST00000173009 Efcab2Q9CQ46 164 aa25.78■■□□□ 1.72
Lig3-209ENSMUST00000173009 Ubr2Q6WKZ8 1755 aa25.78■■□□□ 1.72
Lig3-209ENSMUST00000173009 Atg3Q9CPX6 314 aa25.77■■□□□ 1.72
Lig3-209ENSMUST00000173009 Rgs17Q9QZB0 210 aa25.77■■□□□ 1.72
Lig3-209ENSMUST00000173009 Myo5bP21271 1818 aa25.76■■□□□ 1.71
Lig3-209ENSMUST00000173009 CastP51125 788 aa25.76■■□□□ 1.71
Lig3-209ENSMUST00000173009 Eif4a1P60843 406 aaKnown RBP25.76■■□□□ 1.71
Lig3-209ENSMUST00000173009 Cyp2d12Q8BVD2 504 aa25.76■■□□□ 1.71
Lig3-209ENSMUST00000173009 Klc3Q91W40 508 aa25.76■■□□□ 1.71
Lig3-209ENSMUST00000173009 Arhgap33Q80YF9 1305 aa25.75■■□□□ 1.71
Lig3-209ENSMUST00000173009 Tnnt1O88346 262 aa25.75■■□□□ 1.71
Lig3-209ENSMUST00000173009 Cap2Q9CYT6 476 aa25.75■■□□□ 1.71
Lig3-209ENSMUST00000173009 Tjp1P39447 1745 aaKnown RBP25.75■■□□□ 1.71
Lig3-209ENSMUST00000173009 Eif5bQ05D44 1216 aaKnown RBP25.74■■□□□ 1.71
Lig3-209ENSMUST00000173009 Ccar1Q8CH18 1146 aaKnown RBP25.74■■□□□ 1.71
Lig3-209ENSMUST00000173009 AceP09470 1312 aa25.74■■□□□ 1.71
Lig3-209ENSMUST00000173009 Q3TQI7 289 aaKnown RBP25.72■■□□□ 1.71
Lig3-209ENSMUST00000173009 Polr3glQ8R0C0 218 aa25.72■■□□□ 1.71
Lig3-209ENSMUST00000173009 Smg7Q5RJH6 1138 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms