RNA–Protein interactions for RNA: ENSMUST00000162244.7

Cpsf4-207, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Cpsf4, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-207ENSMUST00000162244 Rtf1A2AQ19 715 aaKnown RBP22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Gm7361D3Z6R1 267 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 5031410I06RikE9Q4E0 267 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Gm1979E9QAN3 267 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Gm5862K7N5V5 267 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Gm10220K7N660 267 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Slc4a2P13808 1237 aaKnown RBP22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Nsd3Q6P2L6 1439 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Tns2Q8CGB6 1400 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Tnks1bp1P58871 1720 aa22.79■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Cavin4A2AMM0 362 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Ppfibp2O35711 882 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Slc5a1Q8C3K6 665 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Ssfa2Q922B9 1252 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Ahnak2E9PYB0 1738 aaKnown RBP22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 GakQ99KY4 1305 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Znf541Q0GGX2 1363 aa22.78■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Pdzd9Q9D9M4 266 aa22.77■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Col22a1E9Q7P1 1613 aa22.77■■□□□ 1.24
Cpsf4-207ENSMUST00000162244 Larp1Q6ZQ58 1072 aaKnown RBP22.76■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 ApobrQ8VBT6 942 aa22.76■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Aox2Q5SGK3 1345 aa22.76■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Lrit1Q8K099 624 aa22.76■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Rgs17Q9QZB0 210 aa22.76■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Ly75Q60767 1723 aa22.75■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 GalcP54818 684 aa22.75■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Ccdc6D3YZP9 469 aa22.74■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Hmgb2P30681 210 aaKnown RBP22.74■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Stra8P70278 393 aa22.74■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Asic4Q7TNS7 539 aa22.74■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Swt1Q9DBQ9 907 aa22.74■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Afg3l2Q8JZQ2 802 aaKnown RBP22.73■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Arfgef2A2A5R2 1792 aa22.73■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Mak16Q8BGS0 296 aaKnown RBP22.72■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Uspl1Q3ULM6 1089 aa22.71■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Ccnl1Q52KE7 532 aaKnown RBP22.71■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Bsdc1Q80Y55 427 aa22.71■■□□□ 1.23
Cpsf4-207ENSMUST00000162244 Trpm3Q5F4S9 1721 aa22.7■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Abcc12Q80WJ6 1366 aa22.7■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Rps6ka4Q9Z2B9 773 aa22.7■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Ncbp3Q8BZR9 615 aaKnown RBP22.69■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Arhgap33Q80YF9 1305 aa22.68■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Dusp27Q148W8 1138 aa22.67■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Vars2Q3U2A8 1060 aa22.67■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Sos1Q62245 1319 aa22.66■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Usp19Q3UJD6 1360 aa22.66■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Klc3Q91W40 508 aa22.64■■□□□ 1.22
Cpsf4-207ENSMUST00000162244 Pnpla7A2AJ88 1352 aa22.64■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Sos2Q02384 1333 aa22.64■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Uhrf1bp1B2KF50 1429 aa22.63■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Snap23O09044 210 aa22.63■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Hdac6Q9Z2V5 1149 aa22.63■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Adamtsl1Q8BLI0 1745 aa22.62■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Crb1Q8VHS2 1405 aa22.62■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Apba2P98084 750 aa22.61■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 PappaQ8R4K8 1624 aa22.61■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Ccdc155Q80VJ8 648 aa22.6■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Jmjd4Q8BFT6 427 aa22.6■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Ints5Q8CHT3 1018 aa22.6■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 CrbnQ8C7D2 445 aa22.59■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Kiaa0319lQ8K135 1048 aa22.59■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Ralbp1Q62172 648 aa22.58■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Btbd11Q6GQW0 1109 aa22.58■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 OscarQ8VBT3 265 aa22.58■■□□□ 1.21
Cpsf4-207ENSMUST00000162244 Pim2Q62070 370 aa22.57■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Ankrd13dQ6PD24 605 aa22.57■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Q8BT18 775 aa22.57■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Speer4f1Q9D5Q6 258 aa22.57■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Snapc4Q8BP86 1333 aa22.57■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Anks4bQ8K3X6 423 aa22.55■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Smg7Q5RJH6 1138 aaKnown RBP22.54■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Gnai1B2RSH2 354 aa22.53■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Nkx2-3P97334 362 aa22.53■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Atg3Q9CPX6 314 aa22.53■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Gnai3Q9DC51 354 aa22.53■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Erbb3Q61526 1339 aa22.53■■□□□ 1.2
Cpsf4-207ENSMUST00000162244 Ggnbp2Q5SV77 696 aa22.51■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Neurod2Q62414 383 aa22.51■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Efcab2Q9CQ46 164 aa22.51■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 AceP09470 1312 aa22.51■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Rad21Q61550 635 aaKnown RBP22.5■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Dcaf5Q80T85 946 aa22.5■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Prim1P20664 417 aa22.5■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Pde4dQ01063 747 aa22.5■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 NudcO35685 332 aaKnown RBP22.47■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Cap2Q9CYT6 476 aa22.47■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Tjp1P39447 1745 aaKnown RBP22.47■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Ubr2Q6WKZ8 1755 aa22.47■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Bicdl1A0JNT9 577 aa22.46■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Cers3Q1A3B0 383 aa22.46■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 U2surpQ6NV83 1029 aaKnown RBP22.46■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Foxp4Q9DBY0 795 aaKnown RBP22.46■■□□□ 1.19
Cpsf4-207ENSMUST00000162244 Atxn3Q9CVD2 355 aa22.45■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 TefQ9JLC6 301 aa22.45■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Adcy9P51830 1353 aa22.44■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Cdc37l1Q9CZP7 335 aa22.44■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Abca3Q8R420 1704 aa22.44■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Kdm2bQ6P1G2 1309 aa22.43■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Irx6Q9ER75 438 aa22.43■■□□□ 1.18
Cpsf4-207ENSMUST00000162244 Flad1Q8R123 492 aa22.42■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms