RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Casz1Q9CWL2 1761 aa24.88■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Rnaseh2aQ9CWY8 301 aa24.87■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Sned1Q70E20 1403 aa24.86■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Klc3Q91W40 508 aa24.85■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Speer4bQ9D9F7 267 aa24.85■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Larp1Q6ZQ58 1072 aaKnown RBP24.83■■□□□ 1.57
Sqstm1-205ENSMUST00000143379 Ccne1Q61457 408 aa24.82■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 Camkk2Q8C078 588 aa24.8■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 Sumf1Q8R0F3 372 aa24.8■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 Bicdl1A0JNT9 577 aa24.79■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 Hmgb2P30681 210 aaKnown RBP24.77■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 ApobrQ8VBT6 942 aa24.77■■□□□ 1.56
Sqstm1-205ENSMUST00000143379 Birc3O08863 600 aa24.76■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Spon1Q8VCC9 807 aa24.76■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Cyp2c69E9PXC3 491 aa24.74■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Cyp2c40P56657 491 aa24.74■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 PappaQ8R4K8 1624 aa24.74■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Kiaa1107Q80TK0 1369 aa24.73■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 NppbP40753 121 aa24.72■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Scaf1Q5U4C3 1256 aaKnown RBP24.72■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 CoblQ5NBX1 1337 aaKnown RBP24.71■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Ccnl1Q52KE7 532 aaKnown RBP24.71■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Simc1E9Q6E9 1354 aa24.7■■□□□ 1.55
Sqstm1-205ENSMUST00000143379 Plch1Q4KWH5 1682 aa24.7■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Aplp2Q06335 707 aa24.7■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Ppp1r37Q8BKR5 712 aa24.7■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 ThemisQ8BGW0 636 aa24.68■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Taf1dQ9D4V4 322 aa24.68■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Col11a2Q64739 1736 aa24.67■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Tns2Q8CGB6 1400 aa24.66■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Gm13023A2A8N2 498 aa24.65■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Ubr3Q5U430 1889 aa24.65■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 4930572O03RikQ8C5Y0 211 aa24.65■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 CpzQ8R4V4 654 aa24.65■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Megf6Q80V70 1572 aa24.64■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 VwdeQ6DFV8 926 aa24.64■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Ppargc1bQ8VHJ7 1014 aa24.64■■□□□ 1.54
Sqstm1-205ENSMUST00000143379 Golgb1E9PVZ8 3238 aa24.63■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Akap2O54931 893 aa24.63■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 FktnQ8R507 461 aa24.63■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Spata31d1bE9QA57 1361 aa24.63■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Parp14Q2EMV9 1817 aa24.63■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 ArsiQ32KI9 573 aa24.62■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Cyp2c67Q569X9 491 aa24.62■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Podxl2Q8CAE9 603 aa24.62■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Tmf1B9EKI3 1091 aa24.61■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Tgfb2P27090 414 aa24.6■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Itgb4A2A863 1818 aa24.6■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Tjp1P39447 1745 aaKnown RBP24.6■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Togaram1Q6A070 1776 aaKnown RBP24.59■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 Crb1Q8VHS2 1405 aa24.59■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 SnrkQ8VDU5 748 aa24.58■■□□□ 1.53
Sqstm1-205ENSMUST00000143379 ScaperF8VQ70 1398 aaKnown RBP24.56■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Kdm6aO70546 1401 aa24.56■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Hdac6Q9Z2V5 1149 aa24.56■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Tlr8P58682 1032 aa24.55■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Trpm3Q5F4S9 1721 aa24.55■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Msh6P54276 1358 aaKnown RBP24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Gm21663A0A0G2JE01 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Gm7361D3Z6R1 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 5031410I06RikE9Q4E0 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Gm1979E9QAN3 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Gm5862K7N5V5 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Gm10220K7N660 267 aa24.54■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Cyp2c68K7N6C2 491 aa24.53■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 Smarcc1P97496 1104 aa24.52■■□□□ 1.52
Sqstm1-205ENSMUST00000143379 1810065E05RikQ5NC41 235 aa24.51■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Ints5Q8CHT3 1018 aa24.51■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Slc4a1apE9PX68 744 aa24.5■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Eya1P97767 591 aa24.5■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Upf1Q9EPU0 1124 aaKnown RBP24.5■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 TrhQ62361 256 aa24.49■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Atg3Q9CPX6 314 aa24.49■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Rpgrip1Q9EPQ2 1331 aa24.49■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 C4bP01029 1738 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Hoxb7P09024 217 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 NogP97466 232 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Gtpbp6Q3U6U5 514 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Rad17Q6NXW6 688 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 B4galnt4Q766D5 1034 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Miga2Q8BK03 593 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Slc5a1Q8C3K6 665 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 StrcQ8VIM6 1809 aa24.47■■□□□ 1.51
Sqstm1-205ENSMUST00000143379 Asic4Q7TNS7 539 aa24.45■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 WasP70315 520 aa24.44■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Stxbp5lQ5DQR4 1185 aa24.44■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Eif3bQ8JZQ9 803 aaKnown RBP24.44■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Klrk1O54709 232 aa24.43■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Nedd4P46935 887 aaKnown RBP24.43■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 EgfrQ01279 1210 aa24.42■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 IbtkQ6ZPR6 1352 aaKnown RBP24.41■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Sos1Q62245 1319 aa24.39■■□□□ 1.5
Sqstm1-205ENSMUST00000143379 Slurp2P0DP59 97 aa24.39■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 Eif4a2P10630 407 aa24.39■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 Dcaf5Q80T85 946 aa24.39■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 Cap2Q9CYT6 476 aa24.39■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 PgfP49764 158 aa24.38■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 SobpQ0P5V2 864 aa24.38■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 RtcbQ99LF4 505 aaKnown RBP24.38■■□□□ 1.49
Sqstm1-205ENSMUST00000143379 Frmpd3A0A140LIW3 1774 aa24.38■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms