RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Nwd2Q6P5U7 1742 aa9.78□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Gm21680A0A0G2JGR8 267 aa9.78□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Nup153E9Q3G8 1462 aaKnown RBP9.78□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Elp1Q7TT37 1333 aaKnown RBP9.78□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Eif3bQ8JZQ9 803 aaKnown RBP9.78□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Anks4bQ8K3X6 423 aa9.77□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Chmp7Q8R1T1 451 aa9.77□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Tns2Q8CGB6 1400 aa9.77□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Kcnh4A2A5F7 1018 aa9.77□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Vps33bP59016 617 aa9.77□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ltbp1Q8CG19 1712 aa9.77□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ankrd23Q812A3 306 aa9.77□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Sik1Q60670 779 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Sgsm1Q8BPQ7 1093 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ccdc30Q8BVF4 654 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Aox2Q5SGK3 1345 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Abcc12Q80WJ6 1366 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Sos1Q62245 1319 aa9.76□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Myo5bP21271 1818 aa9.75□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Exoc5Q3TPX4 708 aa9.75□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Phkg2Q9DB30 406 aa9.75□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ddb1Q3U1J4 1140 aaKnown RBP9.75□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Atxn3Q9CVD2 355 aa9.75□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Pdzd9Q9D9M4 266 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gm21663A0A0G2JE01 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gnai1B2RSH2 354 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gm7361D3Z6R1 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 5031410I06RikE9Q4E0 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gm1979E9QAN3 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gm5862K7N5V5 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gm10220K7N660 267 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Gnai3Q9DC51 354 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Slc5a1Q8C3K6 665 aa9.74□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ssfa2Q922B9 1252 aa9.73□□□□□ -0.85
Ube4a-204ENSMUST00000138559 PappaQ8R4K8 1624 aa9.73□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Snap23O09044 210 aa9.73□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ankrd50F7BE84 1390 aa9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 NudcO35685 332 aaKnown RBP9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Larp1Q6ZQ58 1072 aaKnown RBP9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Asic4Q7TNS7 539 aa9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ttc21aQ8C0S4 1314 aa9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Taok3Q8BYC6 898 aa9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Cdc37l1Q9CZP7 335 aa9.72□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Znf710Q3U288 666 aa9.71□□□□□ -0.85
Ube4a-204ENSMUST00000138559 Ubr2Q6WKZ8 1755 aa9.71□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Rbm25B2RY56 838 aaKnown RBP9.71□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ksr2Q3UVC0 959 aa9.71□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ggnbp2Q5SV77 696 aa9.71□□□□□ -0.86
Ube4a-204ENSMUST00000138559 U2surpQ6NV83 1029 aaKnown RBP9.71□□□□□ -0.86
Ube4a-204ENSMUST00000138559 ApobrQ8VBT6 942 aa9.7□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Plekhh1Q80TI1 1356 aa9.7□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ccar1Q8CH18 1146 aaKnown RBP9.69□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Eif5bQ05D44 1216 aaKnown RBP9.69□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Prim1P20664 417 aa9.69□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Btbd11Q6GQW0 1109 aa9.69□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Usp16Q99LG0 825 aa9.69□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Upf2A2AT37 1269 aaKnown RBP9.68□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ccnl1Q52KE7 532 aaKnown RBP9.68□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ccdc155Q80VJ8 648 aa9.68□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ly75Q60767 1723 aa9.68□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Crb1Q8VHS2 1405 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 4930523C07RikE9Q2T4 99 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ppp6r1Q7TSI3 856 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Klhdc4Q921I2 584 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 1700019A02RikA0A087WPV9 146 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Nsd3Q6P2L6 1439 aa9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Tjp1P39447 1745 aaKnown RBP9.67□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Pibf1E9Q6K3 756 aa9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Igsf1Q7TQA1 1317 aa9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Polr3glQ8R0C0 218 aa9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Zcrb1Q9CZ96 217 aaKnown RBP9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Nkx2-3P97334 362 aa9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Gas2l2Q5SSG4 860 aa9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Foxp4Q9DBY0 795 aaKnown RBP9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Senp3Q9EP97 568 aaKnown RBP9.66□□□□□ -0.86
Ube4a-204ENSMUST00000138559 CastP51125 788 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Q3TQI7 289 aaKnown RBP9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Sugp2Q8CH09 1067 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Trim26Q99PN3 545 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ccdc171E9Q1U1 1324 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Ttc41Q692V3 1318 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Dlg5E9Q9R9 1921 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Irx6Q9ER75 438 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 AceP09470 1312 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 GakQ99KY4 1305 aa9.65□□□□□ -0.86
Ube4a-204ENSMUST00000138559 Kank1E9Q238 1360 aa9.65□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Col1a2Q01149 1372 aa9.65□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Tiam2Q6ZPF3 1715 aa9.65□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Ints5Q8CHT3 1018 aa9.64□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Gm6268A2A3U9 297 aa9.64□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Ppfibp2O35711 882 aa9.64□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Efcab2Q9CQ46 164 aa9.64□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Hdac6Q9Z2V5 1149 aa9.64□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Ubap1lG3UW59 384 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Bsdc1Q80Y55 427 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Ccdc60Q8C4J0 545 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Abca3Q8R420 1704 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Klc3Q91W40 508 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Tnnt1O88346 262 aa9.63□□□□□ -0.87
Ube4a-204ENSMUST00000138559 Eif4a1P60843 406 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 121.4 ms