RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Ppp1r3fQ9JIG4 799 aa12.01□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Plch1Q4KWH5 1682 aa12□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Togaram1Q6A070 1776 aaKnown RBP12□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Adamts19P59509 1210 aa12□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Gjd4Q8BSD4 364 aa12□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Htra3Q9D236 459 aa12□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Nlgn2Q69ZK9 836 aa11.99□□□□□ -0.49
Scn8a-202ENSMUST00000096198 TnrQ8BYI9 1358 aa11.99□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Scn11aQ9R053 1765 aa11.98□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Rfx7F8VPJ6 1459 aa11.98□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Atf5O70191 283 aa11.98□□□□□ -0.49
Scn8a-202ENSMUST00000096198 C4bP01029 1738 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 UacaQ8CGB3 1411 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 TonslQ6NZL6 1363 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Setdb1O88974 1307 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Bicdl1A0JNT9 577 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Ahnak2E9PYB0 1738 aaKnown RBP11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Col11a2Q64739 1736 aa11.97□□□□□ -0.49
Scn8a-202ENSMUST00000096198 ScaperF8VQ70 1398 aaKnown RBP11.96□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Kcnh4A2A5F7 1018 aa11.96□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Zpr1Q62384 459 aa11.96□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Cdk19Q8BWD8 501 aa11.96□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Gimap6Q8K349 305 aa11.96□□□□□ -0.49
Scn8a-202ENSMUST00000096198 Srpk2O54781 681 aaKnown RBP11.95□□□□□ -0.5
Scn8a-202ENSMUST00000096198 B230104I21RikQ3USW4 141 aa11.95□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Kcnc4Q8R1C0 628 aa11.95□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Mkrn1Q9QXP6 481 aa11.95□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Rps6ka4Q9Z2B9 773 aa11.95□□□□□ -0.5
Scn8a-202ENSMUST00000096198 NppbP40753 121 aa11.94□□□□□ -0.5
Scn8a-202ENSMUST00000096198 CrklP47941 303 aa11.94□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Tlr8P58682 1032 aa11.94□□□□□ -0.5
Scn8a-202ENSMUST00000096198 OptnQ8K3K8 584 aa11.94□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Map2P20357 1828 aa11.93□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Frmpd3A0A140LIW3 1774 aa11.93□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Gm21190A0A0G2JGJ6 266 aa11.93□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Ncoa4Q5U4H9 625 aa11.93□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Washc2Q6PGL7 1334 aa11.92□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Sox10Q04888 466 aa11.92□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Ric1Q69ZJ7 1422 aa11.92□□□□□ -0.5
Scn8a-202ENSMUST00000096198 FocadA2AKG8 1798 aa11.92□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Magea8O89012 320 aa11.91□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Klc3Q91W40 508 aa11.91□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Pbx4Q99NE9 378 aa11.91□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Ubr3Q5U430 1889 aa11.91□□□□□ -0.5
Scn8a-202ENSMUST00000096198 StrcQ8VIM6 1809 aa11.9□□□□□ -0.5
Scn8a-202ENSMUST00000096198 NktrP30415 1453 aa11.9□□□□□ -0.5
Scn8a-202ENSMUST00000096198 1810065E05RikQ5NC41 235 aa11.9□□□□□ -0.5
Scn8a-202ENSMUST00000096198 Nup188Q6ZQH8 1759 aa11.9□□□□□ -0.51
Scn8a-202ENSMUST00000096198 CfhP06909 1234 aa11.89□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Slurp2P0DP59 97 aa11.89□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Zranb3Q6NZP1 1069 aa11.89□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Podnl1Q6P3Y9 559 aa11.89□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Slit1Q80TR4 1531 aa11.89□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Slc4a9E9PUP3 929 aa11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Tmem132eQ6IEE6 982 aa11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Nol11Q8BJW5 723 aaKnown RBP11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Stk32bQ9JJX8 414 aa11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Irx5Q9JKQ4 484 aa11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 PalmQ9Z0P4 383 aa11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Gm42715A0A087WP63 3095 aaKnown RBP11.88□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Elp1Q7TT37 1333 aaKnown RBP11.87□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Dclk1Q9JLM8 756 aa11.87□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Col6a3E9PWQ3 3284 aa11.87□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Kdm6aO70546 1401 aa11.86□□□□□ -0.51
Scn8a-202ENSMUST00000096198 TatQ8QZR1 454 aa11.86□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Fam50bQ9WTJ8 334 aa11.86□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Zfp646Q6NV66 1788 aa11.85□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Gm20521D3Z5F7 333 aa11.85□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Gm13023A2A8N2 498 aa11.84□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Fmnl2A2APV2 1086 aa11.84□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Ifit1bl1D3Z6F0 470 aa11.84□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Nlgn1Q99K10 843 aa11.84□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Col4a5Q63ZW6 1691 aa11.84□□□□□ -0.51
Scn8a-202ENSMUST00000096198 Sipa1l1Q8C0T5 1782 aa11.83□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Szt2A2A9C3 3431 aa11.83□□□□□ -0.52
Scn8a-202ENSMUST00000096198 IqubQ8CDK3 788 aa11.83□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Spire2Q8K1S6 718 aa11.83□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Adamts13Q769J6 1426 aa11.83□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Gm21680A0A0G2JGR8 267 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 NpcdF8VQB8 469 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Tbc1d32Q3URV1 1296 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Dennd6aQ8BH65 605 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 IarsQ8BU30 1262 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Cc2d1aQ8K1A6 943 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Kcnh5Q920E3 988 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 RalgapbQ8BQZ4 1484 aa11.82□□□□□ -0.52
Scn8a-202ENSMUST00000096198 CoblQ5NBX1 1337 aaKnown RBP11.81□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Spata31d1bE9QA57 1361 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Plekhd1B2RPU2 505 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Cabp4Q8VHC5 271 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Ripk3Q9QZL0 486 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Trpm7Q923J1 1863 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Map3k19E9Q3S4 1311 aa11.8□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Cpsf1Q9EPU4 1441 aaKnown RBP11.79□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Cfap70D3YVL2 1141 aa11.79□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Rasgrp4Q8BTM9 673 aa11.79□□□□□ -0.52
Scn8a-202ENSMUST00000096198 CatipB9EKE5 520 aa11.78□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Hmgb2P30681 210 aaKnown RBP11.78□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Idi2Q8BFZ6 227 aa11.78□□□□□ -0.52
Scn8a-202ENSMUST00000096198 Mansc4Q3UU94 337 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms