RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Ric3Q8BPM6 367 aa13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Aldh1l2Q8K009 923 aa13.06□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Nid2O88322 1403 aa13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Nup153E9Q3G8 1462 aaKnown RBP13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Ggnbp2Q5SV77 696 aa13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Wwc1Q5SXA9 1104 aa13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 SkilQ60665 675 aa13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Ppm1gQ61074 542 aa13.05□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Pnmal2G3X9N3 661 aa13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Prim1P20664 417 aa13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Kcnh5Q920E3 988 aa13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Gsdma3Q5Y4Y6 464 aa13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Snap23O09044 210 aa13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 CanxP35564 591 aaKnown RBP13.04□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Slain2Q8CI08 581 aa13.03□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Phf23Q8BSN5 401 aa13.03□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Foxp4Q9DBY0 795 aaKnown RBP13.03□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Brd1E9PZ26 1189 aaKnown RBP13.02□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Map7O88735 730 aa13.02□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Dnai1Q8C0M8 701 aa13.02□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 TatQ8QZR1 454 aa13.02□□□□□ -0.32
Ccdc87-201ENSMUST00000088653 Dlg5E9Q9R9 1921 aa13.02□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.02□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 LifrP42703 1092 aa13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Aifm3Q3TY86 605 aa13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Kcna6Q61923 529 aa13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Hsp90ab1P11499 724 aaKnown RBP13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Amotl1Q9D4H4 968 aa13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Scn4aQ9ER60 1841 aa13.01□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 1700019A02RikA0A087WPV9 146 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Tbc1d32Q3URV1 1296 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 TnrQ8BYI9 1358 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Kif18aQ91WD7 886 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Fmnl2A2APV2 1086 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Trim27Q62158 513 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Cetn4Q8K4K1 168 aa13□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Tm6sf1P58749 370 aa12.99□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Dnajc10Q9DC23 793 aa12.99□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Abcc12Q80WJ6 1366 aa12.99□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Pibf1E9Q6K3 756 aa12.99□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Ccdc27Q3V036 639 aa12.99□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Eif2s2Q99L45 331 aaKnown RBP12.98□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Atf5O70191 283 aa12.98□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Ppp1r9bQ6R891 817 aaKnown RBP12.98□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 HnrnpuQ8VEK3 800 aaKnown RBP12.98□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Farp2Q91VS8 1065 aa12.98□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Sv2bQ8BG39 683 aa12.97□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Amotl2Q8K371 772 aa12.97□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Evi5lH3BKQ3 813 aa12.97□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 BcorQ8CGN4 1759 aa12.97□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 CarsQ9ER72 831 aaKnown RBP12.96□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Ppp1r37Q8BKR5 712 aa12.96□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 KnstrnQ9D9Z1 312 aaKnown RBP12.96□□□□□ -0.33
Ccdc87-201ENSMUST00000088653 Sart3Q9JLI8 962 aaKnown RBP12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Pnpla7A2AJ88 1352 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Aplp1Q03157 653 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Cgnl1Q6AW69 1298 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Aldh8a1Q8BH00 487 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Dzip1Q8BMD2 852 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Mre11Q61216 706 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Cog6Q8R3I3 657 aa12.95□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Simc1E9Q6E9 1354 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Q3TQI7 289 aaKnown RBP12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Cyp2d12Q8BVD2 504 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Aox2Q5SGK3 1345 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Abca15E9PWH4 1668 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Wdr63B2RY71 923 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 FocadA2AKG8 1798 aa12.94□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Triml2E9PW10 424 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Rabep1O35551 862 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Fam83gQ5SWY7 812 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Fam13aQ8BGI4 693 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Rapgef3Q8VCC8 918 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Ltbp4Q8K4G1 1666 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Brwd3A2AHJ4 1799 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Prkar2bP31324 416 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Chpf2Q3UU43 768 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Eif4g2Q62448 906 aaKnown RBP12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Tnks1bp1P58871 1720 aa12.93□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Col15a1O35206 1367 aa12.92□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Sptbn5F6UCX4 1208 aa12.92□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Bcl9lQ67FY2 1494 aa12.92□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 GnpatP98192 678 aa12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Nol11Q8BJW5 723 aaKnown RBP12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Gcc1Q9D4H2 778 aa12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Fgd1P52734 960 aa12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Mfap1aC0HKD8 439 aaKnown RBP12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Mfap1bC0HKD9 439 aaKnown RBP12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Atf3Q60765 181 aa12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Disp3A3KFU9 1347 aa12.91□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Cnksr1A2A9K7 700 aa12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Eif4a1P60843 406 aaKnown RBP12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Mcm2P97310 904 aa12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Dixdc1Q80Y83 711 aa12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 DccP70211 1447 aa12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 ScaperF8VQ70 1398 aaKnown RBP12.9□□□□□ -0.34
Ccdc87-201ENSMUST00000088653 Kif2cQ922S8 721 aa12.89□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Col1a2Q01149 1372 aa12.89□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 FanclQ9CR14 375 aa12.89□□□□□ -0.35
Ccdc87-201ENSMUST00000088653 Stk36Q69ZM6 1316 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms