RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Homer1Q9Z2Y3 366 aa14.46□□□□□ -0.09
Vcpip1-201ENSMUST00000057438 Ncapd3Q6ZQK0 1506 aa14.46□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ppfibp2O35711 882 aa14.46□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Samm50Q8BGH2 469 aa14.46□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Puf60Q3UEB3 564 aaKnown RBP14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Hspa4Q61316 841 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Pdia4P08003 638 aaKnown RBP14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Cct4P80315 539 aaKnown RBP14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Gimap6Q8K349 305 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 DesP31001 469 aaKnown RBP14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ctage5Q8R311 779 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Uri1Q3TLD5 531 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Tsg101Q61187 391 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Atp2b2Q9R0K7 1198 aa14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Knop1Q9Z2Q2 478 aaKnown RBP14.45□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Skor1Q8BX46 964 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Frmd3Q8BHD4 595 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 MvpQ9EQK5 861 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 IbtkQ6ZPR6 1352 aaKnown RBP14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Sf3b2Q3UJB0 878 aaKnown RBP14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Wwc1Q5SXA9 1104 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Hs1bp3Q3TC93 395 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Fam13aQ8BGI4 693 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Sept6Q9R1T4 434 aa14.44□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Cwc27Q3TKY6 469 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Nol8Q3UHX0 1147 aaKnown RBP14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Smco2Q9DA21 347 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Top1mtQ8R4U6 593 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Gm21680A0A0G2JGR8 267 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Fbln2P37889 1221 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Bms1Q6PGF5 1284 aaKnown RBP14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 TchhA0A0B4J1F9 1599 aa14.43□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Tubb4bP68372 445 aaKnown RBP14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Pms1Q8K119 917 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 TimelessQ9R1X4 1197 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 ZwintQ9CQU5 252 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Cnnm1Q0GA42 951 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Shtn1Q8K2Q9 631 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ccdc73Q8CDM4 1066 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Flad1Q8R123 492 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Rbm5Q91YE7 815 aaKnown RBP14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Dusp27Q148W8 1138 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Gbp8Q2V6D6 525 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ctr9Q62018 1173 aaKnown RBP14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Calml4Q91WQ9 153 aa14.42□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Irgm2A0A140LIF8 407 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Stx1aO35526 288 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ktn1Q61595 1327 aaKnown RBP14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Bcl2l13P59017 434 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Eif3j1Q3UGC7 261 aaKnown RBP14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Eif3j2Q66JS6 263 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Znf287Q9EQB9 759 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Erich4Q3UNU4 136 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Tacc1Q6Y685 774 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Hmgb2P30681 210 aaKnown RBP14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Plekhg5Q66T02 1073 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Als2cr12Q8BVM7 383 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Rnf34Q99KR6 376 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ehbp1Q69ZW3 1231 aa14.41□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Spty2d1Q68FG3 682 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Gbp1Q01514 589 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Themis2Q91YX0 663 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Anapc15-psA0A140T8L6 141 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ddx23D3Z0M9 819 aaKnown RBP14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Akap2O54931 893 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Stk11ipQ3TAA7 1072 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Tax1bp1Q3UKC1 814 aaKnown RBP14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Cetn1P41209 172 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Ppip5k2Q6ZQB6 1129 aa14.4□□□□□ -0.1
Vcpip1-201ENSMUST00000057438 Mex3cQ05A36 652 aaKnown RBP14.39□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Ccdc93Q7TQK5 629 aa14.39□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Rcan3Q9JKK0 239 aa14.39□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 AidaQ8C4Q6 305 aa14.39□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Kcnn1Q9EQR3 537 aa14.39□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Cc2d1bQ8BRN9 848 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Ddx58Q6Q899 926 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Mum1Q6DID5 682 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 TkfcQ8VC30 578 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Gm45140A0A0N4SUM8 220 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Igbp1bQ9QZ29 343 aa14.38□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 4921530L21RikQ9CQ47 274 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Fam107bQ3TGF2 131 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Egfem1Q8C088 590 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 NrkQ9R0G8 1455 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Gse1Q3U3C9 1213 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Tmx4Q8C0L0 335 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Vps37dQ810I0 261 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Cep55Q8BT07 462 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Cdc37l1Q9CZP7 335 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Cbx1P83917 185 aaKnown RBP14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Nop53Q8BK35 484 aaKnown RBP14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Trim34aQ99PP6 485 aa14.37□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Wdr63B2RY71 923 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 IqcgQ80W32 419 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Ptpdc1Q6NZK8 747 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Ccdc158Q8CDI6 1109 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Zranb3Q6NZP1 1069 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Tubb4aQ9D6F9 444 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Strn4P58404 760 aa14.36□□□□□ -0.11
Vcpip1-201ENSMUST00000057438 Sass6Q80UK7 654 aa14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms