RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Golim4Q8BXA1 655 aa20.39■□□□□ 0.85
Usp48-201ENSMUST00000055131 Aldh1l1Q8R0Y6 902 aa20.39■□□□□ 0.85
Usp48-201ENSMUST00000055131 CenpqQ9CPQ5 267 aa20.39■□□□□ 0.85
Usp48-201ENSMUST00000055131 Slu7Q8BHJ9 585 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Def6Q8C2K1 630 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Phldb2Q8K1N2 1249 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 AidaQ8C4Q6 305 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Erlin2Q8BFZ9 340 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Slc26a8Q8R0C3 999 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Crocc2F6XLV1 1638 aa20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 ImmtQ8CAQ8 757 aaKnown RBP20.38■□□□□ 0.85
Usp48-201ENSMUST00000055131 Map3k1P53349 1493 aa20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Fam163aQ8CAA5 168 aa20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Bicdl1A0JNT9 577 aa20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Luc7lQ9CYI4 371 aaKnown RBP20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Wdr62Q3U3T8 1523 aa20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ssr1Q9CY50 286 aaKnown RBP20.37■□□□□ 0.85
Usp48-201ENSMUST00000055131 Znf771Q8BJ90 317 aa20.36■□□□□ 0.85
Usp48-201ENSMUST00000055131 ApobrQ8VBT6 942 aa20.36■□□□□ 0.85
Usp48-201ENSMUST00000055131 TnikP83510 1323 aa20.36■□□□□ 0.85
Usp48-201ENSMUST00000055131 Pde4bB1AWC9 736 aa20.36■□□□□ 0.85
Usp48-201ENSMUST00000055131 Galntl5Q9D4M9 431 aa20.36■□□□□ 0.85
Usp48-201ENSMUST00000055131 Lrrc45Q8CIM1 670 aa20.35■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ift57Q8BXG3 429 aa20.35■□□□□ 0.85
Usp48-201ENSMUST00000055131 Map4k4P97820 1233 aaKnown RBP20.35■□□□□ 0.85
Usp48-201ENSMUST00000055131 Gjb2Q00977 226 aa20.35■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ccdc39Q9D5Y1 937 aa20.35■□□□□ 0.85
Usp48-201ENSMUST00000055131 Cct4P80315 539 aaKnown RBP20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Slc52a2Q9D8F3 450 aa20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ercc6lQ8BHK9 1240 aa20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 MycnP03966 462 aaKnown RBP20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Tnni2P13412 182 aa20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Cfap45Q9D9U9 551 aa20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Lmbr1Q9JIT0 490 aa20.34■□□□□ 0.85
Usp48-201ENSMUST00000055131 Strn4P58404 760 aa20.33■□□□□ 0.85
Usp48-201ENSMUST00000055131 Nup133Q8R0G9 1155 aa20.33■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ppp1r42Q8R1Z4 357 aa20.33■□□□□ 0.85
Usp48-201ENSMUST00000055131 NgdnQ9DB96 315 aaKnown RBP20.33■□□□□ 0.85
Usp48-201ENSMUST00000055131 Ccdc181Q80ZU5 509 aa20.33■□□□□ 0.85
Usp48-201ENSMUST00000055131 EappQ5BU09 281 aa20.33■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ltv1Q6NSQ7 470 aaKnown RBP20.33■□□□□ 0.84
Usp48-201ENSMUST00000055131 Adck5Q80V03 582 aa20.33■□□□□ 0.84
Usp48-201ENSMUST00000055131 Gas2l3Q3UWW6 683 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ppp1r15aP17564 657 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Wasf1Q8R5H6 559 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Sall3Q62255 1320 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Sos1Q62245 1319 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Sugp2Q8CH09 1067 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Zbtb22Q9Z0G7 638 aa20.32■□□□□ 0.84
Usp48-201ENSMUST00000055131 Fam184aE9PW83 1143 aa20.31■□□□□ 0.84
Usp48-201ENSMUST00000055131 Prkar2bP31324 416 aa20.31■□□□□ 0.84
Usp48-201ENSMUST00000055131 ZwintQ9CQU5 252 aa20.31■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ncbp1Q3UYV9 790 aaKnown RBP20.31■□□□□ 0.84
Usp48-201ENSMUST00000055131 Camsap1A2AHC3 1581 aa20.31■□□□□ 0.84
Usp48-201ENSMUST00000055131 Plekhm2Q80TQ5 1018 aa20.3■□□□□ 0.84
Usp48-201ENSMUST00000055131 Asxl1P59598 1514 aa20.3■□□□□ 0.84
Usp48-201ENSMUST00000055131 GpkowQ56A08 488 aa20.3■□□□□ 0.84
Usp48-201ENSMUST00000055131 Nol7Q9D7Z3 254 aaKnown RBP20.3■□□□□ 0.84
Usp48-201ENSMUST00000055131 Trim25Q61510 634 aaKnown RBP20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ccdc178Q8CDV0 866 aa20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Nlrp3Q8R4B8 1033 aa20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Mcm3P25206 812 aaKnown RBP20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Otud6bQ8K2H2 294 aa20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Eif3bQ8JZQ9 803 aaKnown RBP20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 Wdr33Q8K4P0 1330 aaKnown RBP20.29■□□□□ 0.84
Usp48-201ENSMUST00000055131 A2mQ6GQT1 1474 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Cep131Q62036 1060 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ces1hD3Z298 562 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Hoxa7P02830 229 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Pafah1b1P63005 410 aaKnown RBP20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Riok1Q922Q2 567 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Gtf2a1Q99PM3 378 aa20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Smc5Q8CG46 1101 aaKnown RBP20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Pdia4P08003 638 aaKnown RBP20.28■□□□□ 0.84
Usp48-201ENSMUST00000055131 Ttc21bQ0HA38 1315 aa20.27■□□□□ 0.84
Usp48-201ENSMUST00000055131 SfswapQ3USH5 945 aaKnown RBP20.27■□□□□ 0.84
Usp48-201ENSMUST00000055131 Mipol1Q9D9F8 279 aa20.27■□□□□ 0.84
Usp48-201ENSMUST00000055131 NexmifQ5DTT1 1515 aa20.27■□□□□ 0.84
Usp48-201ENSMUST00000055131 Q3UJC8 639 aa20.27■□□□□ 0.83
Usp48-201ENSMUST00000055131 Bcar3Q9QZK2 820 aa20.27■□□□□ 0.83
Usp48-201ENSMUST00000055131 Wwc1Q5SXA9 1104 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 Aplp1Q03157 653 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 VeztQ3ZK22 780 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 Naip2Q9QUK4 1447 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 Map9Q3TRR0 646 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 Cep55Q8BT07 462 aa20.26■□□□□ 0.83
Usp48-201ENSMUST00000055131 Lrrfip2Q91WK0 415 aa20.25■□□□□ 0.83
Usp48-201ENSMUST00000055131 Bag3Q9JLV1 577 aaKnown RBP20.25■□□□□ 0.83
Usp48-201ENSMUST00000055131 TchhA0A0B4J1F9 1599 aa20.25■□□□□ 0.83
Usp48-201ENSMUST00000055131 Gbp4Q61107 620 aa20.25■□□□□ 0.83
Usp48-201ENSMUST00000055131 Znf131Q8K3J5 619 aa20.25■□□□□ 0.83
Usp48-201ENSMUST00000055131 Jakmip2D3YXK0 820 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Spag5Q7TME2 1165 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Ccdc155Q80VJ8 648 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Rnf187Q8BFX1 236 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Dnaaf4Q8R368 420 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Cdca7Q9D0M2 382 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 MicalclQ9D5U9 680 aa20.24■□□□□ 0.83
Usp48-201ENSMUST00000055131 Ccne1Q61457 408 aa20.23■□□□□ 0.83
Usp48-201ENSMUST00000055131 TxlnbQ8VBT1 685 aa20.23■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms