RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Mst1rQ62190 1378 aa11.59□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Dmrt2Q8BG36 561 aa11.59□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Rtf1A2AQ19 715 aaKnown RBP11.58□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Ccdc30Q8BVF4 654 aa11.58□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Ginm1Q91WR6 327 aa11.58□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Atxn3Q9CVD2 355 aa11.58□□□□□ -0.55
Ccdc28a-201ENSMUST00000052648 Znf710Q3U288 666 aa11.58□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Aox2Q5SGK3 1345 aa11.58□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 PappaQ8R4K8 1624 aa11.57□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Kcnh4A2A5F7 1018 aa11.57□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Speer4bQ9D9F7 267 aa11.57□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ubr2Q6WKZ8 1755 aa11.57□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Anks4bQ8K3X6 423 aa11.57□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Abcc12Q80WJ6 1366 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Gm21680A0A0G2JGR8 267 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Snap23O09044 210 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Vps33bP59016 617 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Sos1Q62245 1319 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ankrd23Q812A3 306 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Sgsm1Q8BPQ7 1093 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Eif3bQ8JZQ9 803 aaKnown RBP11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Phkg2Q9DB30 406 aa11.56□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Elp1Q7TT37 1333 aaKnown RBP11.55□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Sik1Q60670 779 aa11.55□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Pdzd9Q9D9M4 266 aa11.55□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Chmp7Q8R1T1 451 aa11.54□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ssfa2Q922B9 1252 aa11.54□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ankrd50F7BE84 1390 aa11.54□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Gnai1B2RSH2 354 aa11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Fbln2P37889 1221 aa11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Gnai3Q9DC51 354 aa11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ttc21aQ8C0S4 1314 aa11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Exoc5Q3TPX4 708 aa11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Larp1Q6ZQ58 1072 aaKnown RBP11.53□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Ddb1Q3U1J4 1140 aaKnown RBP11.52□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Asic4Q7TNS7 539 aa11.52□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Cdc37l1Q9CZP7 335 aa11.52□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Dlg5E9Q9R9 1921 aa11.52□□□□□ -0.56
Ccdc28a-201ENSMUST00000052648 Slc5a1Q8C3K6 665 aa11.52□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ly75Q60767 1723 aa11.52□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gm21663A0A0G2JE01 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gm7361D3Z6R1 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 5031410I06RikE9Q4E0 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gm1979E9QAN3 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gm5862K7N5V5 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gm10220K7N660 267 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ggnbp2Q5SV77 696 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Tjp1P39447 1745 aaKnown RBP11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Rbm25B2RY56 838 aaKnown RBP11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ksr2Q3UVC0 959 aa11.51□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Plekhh1Q80TI1 1356 aa11.5□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 NudcO35685 332 aaKnown RBP11.5□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Prim1P20664 417 aa11.5□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Nkx2-3P97334 362 aa11.5□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Gas2l2Q5SSG4 860 aa11.5□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Klhdc4Q921I2 584 aa11.49□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Shank3Q4ACU6 1730 aa11.49□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 U2surpQ6NV83 1029 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ccar1Q8CH18 1146 aaKnown RBP11.48□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ttc41Q692V3 1318 aa11.48□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Taok3Q8BYC6 898 aa11.48□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Usp16Q99LG0 825 aa11.48□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Kank1E9Q238 1360 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Tiam2Q6ZPF3 1715 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Eif5bQ05D44 1216 aaKnown RBP11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ccdc155Q80VJ8 648 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Abca3Q8R420 1704 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Crb1Q8VHS2 1405 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 CastP51125 788 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Btbd11Q6GQW0 1109 aa11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Foxp4Q9DBY0 795 aaKnown RBP11.47□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Ccnl1Q52KE7 532 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 ApobrQ8VBT6 942 aa11.46□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Senp3Q9EP97 568 aaKnown RBP11.46□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 Igsf1Q7TQA1 1317 aa11.46□□□□□ -0.57
Ccdc28a-201ENSMUST00000052648 4930523C07RikE9Q2T4 99 aa11.46□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 L3mbtl2P59178 703 aa11.46□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Ints5Q8CHT3 1018 aa11.46□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Upf2A2AT37 1269 aaKnown RBP11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Pibf1E9Q6K3 756 aa11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Erbb3Q61526 1339 aa11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 GakQ99KY4 1305 aa11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 1700019A02RikA0A087WPV9 146 aa11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Col1a2Q01149 1372 aa11.44□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Ccdc171E9Q1U1 1324 aa11.43□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Trim26Q99PN3 545 aa11.43□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Eif4a1P60843 406 aaKnown RBP11.43□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 BcorQ8CGN4 1759 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Vamp4O70480 141 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Ppp6r1Q7TSI3 856 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Pnpla7A2AJ88 1352 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Msh6P54276 1358 aaKnown RBP11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 AceP09470 1312 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Ccdc60Q8C4J0 545 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Polr3glQ8R0C0 218 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Zcrb1Q9CZ96 217 aaKnown RBP11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Hdac6Q9Z2V5 1149 aa11.42□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Atf5O70191 283 aa11.41□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Q3TQI7 289 aaKnown RBP11.41□□□□□ -0.58
Ccdc28a-201ENSMUST00000052648 Bsdc1Q80Y55 427 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms