RNA–Protein interactions for RNA: ENSMUST00000035661.6

Cspg4-201, Transcript of Chondroitin sulfate proteoglycan 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cspg4, Length 8,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4-201ENSMUST00000035661 Usp54Q8BL06 1588 aaKnown RBP11.67□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Zkscan2G3X952 960 aa11.67□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Gbp4Q61107 620 aa11.67□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Gm10563F6WIE4 79 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Cyb5rlB1AS42 316 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Sbno1Q689Z5 1390 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Nolc1E9Q5C9 702 aaKnown RBP11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Kiaa0753Q6A000 959 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Luc7lQ9CYI4 371 aaKnown RBP11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Ppp2r3aB2RXC8 1150 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 ArsiQ32KI9 573 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Map9Q3TRR0 646 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 TmpoQ61033 693 aaKnown RBP11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Ccdc96Q9CR92 584 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Setd1aE9PYH6 1716 aa11.66□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Cnnm1Q0GA42 951 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Nectin2P32507 530 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Nap1l2P51860 460 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Eva1cP58659 440 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Lrrc7Q80TE7 1490 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Psma5Q9Z2U1 241 aaKnown RBP11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 AlkP97793 1621 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 ItpripQ3TNL8 555 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Btbd11Q6GQW0 1109 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Neurod6P48986 337 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Nol11Q8BJW5 723 aaKnown RBP11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Ppp4r3bQ922R5 820 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Atf7ipQ7TT18 1306 aa11.65□□□□□ -0.54
Cspg4-201ENSMUST00000035661 Smc3Q9CW03 1217 aaKnown RBP11.65□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Nap1l1P28656 391 aaKnown RBP11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 TimelessQ9R1X4 1197 aa11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 NinlQ6ZQ12 1394 aa11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Speer4bQ9D9F7 267 aa11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Nat10Q8K224 1024 aaKnown RBP11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 TxlnbQ8VBT1 685 aa11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Phldb2Q8K1N2 1249 aa11.64□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Znf526Q8BI66 675 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 March6Q6ZQ89 909 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Astn2Q80Z10 1352 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 CrcpO35427 148 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Rhot2Q8JZN7 620 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Prl7d1P04769 244 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Ccp110Q7TSH4 1004 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Hfm1D3Z4R1 1434 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Q9D2X8 372 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Kdm6bQ5NCY0 1641 aa11.63□□□□□ -0.55
Cspg4-201ENSMUST00000035661 PzpQ61838 1495 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm21663A0A0G2JE01 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Ccdc183A2AJB1 534 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm7361D3Z6R1 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 5031410I06RikE9Q4E0 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm1979E9QAN3 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm5862K7N5V5 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm10220K7N660 267 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Spag5Q7TME2 1165 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 MvpQ9EQK5 861 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Elp1Q7TT37 1333 aaKnown RBP11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Pip4k2aO70172 405 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Map3k7clP58500 142 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Kif20aP97329 887 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Nphp1Q9QY53 687 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Polr3gQ6NXY9 223 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Rsph6aQ8CDR2 708 aa11.62□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Gm21680A0A0G2JGR8 267 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Cers3Q1A3B0 383 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Tubb6Q922F4 447 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Spata24Q6P926 205 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Plagl1Q9JLQ4 704 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Ttll13A4Q9F6 804 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Rfx1P48377 963 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Skap1Q3UUV5 355 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Scaf1Q5U4C3 1256 aaKnown RBP11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Lrrcc1Q69ZB0 1026 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Smc2Q8CG48 1191 aaKnown RBP11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 AnlnQ8K298 1121 aaKnown RBP11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Prrc2bQ7TPM1 1486 aaKnown RBP11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Nphp4P59240 1425 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Hmox1P14901 289 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 TnikP83510 1323 aa11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Cdk13Q69ZA1 1511 aaKnown RBP11.61□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Mex3cQ05A36 652 aaKnown RBP11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Trim29Q8R2Q0 587 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Neurl4Q5NCX5 1563 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Aldh1l1Q8R0Y6 902 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 KarsQ99MN1 595 aaKnown RBP11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Mum1Q6DID5 682 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 1700010I14RikQ7TPG0 532 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Ddx54Q8K4L0 874 aaKnown RBP11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Wwc1Q5SXA9 1104 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Trim34bJ3QNR8 485 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Nutm1Q8BHP2 1126 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Farp2Q91VS8 1065 aa11.6□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Frmpd2A0A140LI67 1392 aa11.59□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Trap1aP19473 224 aa11.59□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Fkbp4P30416 458 aa11.59□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Col17a1Q07563 1470 aa11.59□□□□□ -0.55
Cspg4-201ENSMUST00000035661 Samd1D3YXK1 519 aa11.58□□□□□ -0.56
Cspg4-201ENSMUST00000035661 Ints3Q7TPD0 1041 aaKnown RBP11.58□□□□□ -0.56
Cspg4-201ENSMUST00000035661 Kdm2bQ6P1G2 1309 aa11.58□□□□□ -0.56
Cspg4-201ENSMUST00000035661 A0A0U1RNP2 1173 aa11.58□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms