RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Cfap58B2RW38 873 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 CalrP14211 416 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 AidaQ8C4Q6 305 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Pof1bQ8K4L4 587 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Syce3B5KM66 88 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Map9Q3TRR0 646 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ctnnbl1Q9CWL8 563 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 HnrnpmQ9D0E1 729 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Atp2b1G5E829 1220 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Pafah1b1P63005 410 aaKnown RBP16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ercc6lQ8BHK9 1240 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cacna2d4Q5RJF7 1116 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Sh3d21Q7TSG5 549 aa16.79■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Zbtb21E9Q444 1094 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cep57l1Q8VDS7 400 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 L1td1Q587J6 782 aaKnown RBP16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rnf34Q99KR6 376 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ripk4Q9ERK0 786 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Lman1Q9D0F3 517 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Nlrp3Q8R4B8 1033 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 CarsQ9ER72 831 aaKnown RBP16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Synj1Q8CHC4 1574 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ssh1Q76I79 1042 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 4930572O03RikQ8C5Y0 211 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gimap6Q8K349 305 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 TkfcQ8VC30 578 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cd109Q8R422 1442 aa16.78■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Trim55G3X8Y1 545 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Lmbr1Q9JIT0 490 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cfap45Q9D9U9 551 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Knop1Q9Z2Q2 478 aaKnown RBP16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rhot2Q8JZN7 620 aa16.77■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Tspyl3Q3UYP3 334 aa16.77■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Sycp2Q9CUU3 1500 aa16.77■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Slc4a2P13808 1237 aaKnown RBP16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Jade2Q6ZQF7 829 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Gjc1P28229 396 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Slc26a8Q8R0C3 999 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Wdhd1P59328 1117 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 TchpQ3TVW5 497 aa16.76■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Map2k1P31938 393 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ppfia3P60469 1194 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ncapg2Q6DFV1 1138 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Paxip1Q6NZQ4 1056 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 TxlnaQ6PAM1 554 aaKnown RBP16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ccdc172Q810N9 267 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Polr3dQ91WD1 398 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 2310002L09RikQ9D7L5 217 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Dph6Q9CQ28 267 aa16.75■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cyb5rlB1AS42 316 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Rbm19Q8R3C6 952 aaKnown RBP16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ca8P28651 291 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cep131Q62036 1060 aa16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 ImmtQ8CAQ8 757 aaKnown RBP16.74■□□□□ 0.27
Col4a1-201ENSMUST00000033898 SlmapQ3URD3 845 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Plekhg5Q66T02 1073 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Znf692Q3U381 531 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Maco1Q7TQE6 664 aaKnown RBP16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 GpkowQ56A08 488 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Nsrp1Q5NCR9 542 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ccdc155Q80VJ8 648 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Tmx1Q8VBT0 278 aa16.73■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Wasf1Q8R5H6 559 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Med4Q9CQA5 270 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 CftrP26361 1476 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Tubb6Q922F4 447 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 ZwintQ9CQU5 252 aa16.72■□□□□ 0.27
Col4a1-201ENSMUST00000033898 MvpQ9EQK5 861 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Ppp6r1Q7TSI3 856 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Zbtb3Q91X45 518 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Mcm3P25206 812 aaKnown RBP16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Znf653Q6YND2 615 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cep55Q8BT07 462 aa16.71■□□□□ 0.27
Col4a1-201ENSMUST00000033898 Cux1P53564 1515 aa16.71■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Txndc16Q7TN22 820 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cct2P80314 535 aaKnown RBP16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 MicalclQ9D5U9 680 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 TmpoQ61033 693 aaKnown RBP16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Tsg101Q61187 391 aa16.7■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ccdc112A0AUP1 442 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Sptbn5F6UCX4 1208 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Aplp1Q03157 653 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Spag5Q7TME2 1165 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 NapbP28663 298 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Lrrfip1Q3UZ39 729 aaKnown RBP16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Tspyl2Q7TQI8 677 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Nap1l2P51860 460 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cbx1P83917 185 aaKnown RBP16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Paip2Q9D6V8 124 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Nap1l5Q9JJF0 156 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Fez1Q8K0X8 392 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ttc5Q99LG4 440 aa16.69■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Cc2d2aQ8CFW7 1633 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Ift140E9PY46 1464 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Riok1Q922Q2 567 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Larp6Q8BN59 492 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Otud6bQ8K2H2 294 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 NsmfQ99NF2 532 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Exoc8Q6PGF7 716 aa16.68■□□□□ 0.26
Col4a1-201ENSMUST00000033898 Dact3Q0PHV7 610 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms