RNA–Protein interactions for RNA: ENSMUST00000023452.13

Ccdc116-201, Transcript of Coiled-coil domain-containing protein 116, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc116, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116-201ENSMUST00000023452 Utp3Q9JI13 469 aaKnown RBP10.98□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Pdia3P27773 505 aaKnown RBP10.98□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Brf1Q8CFK2 676 aa10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Sf3a1Q8K4Z5 791 aaKnown RBP10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Gripap1Q8VD04 806 aa10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Atf3Q60765 181 aa10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Ggt6Q6PDE7 497 aa10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Iqgap1Q9JKF1 1657 aaKnown RBP10.97□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Tceanc2Q8R2M0 207 aa10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Cdc42bpbQ7TT50 1713 aa10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Syce3B5KM66 88 aa10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Pa2g4P50580 394 aaKnown RBP10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Prune1Q8BIW1 454 aa10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Acsbg1Q99PU5 721 aa10.96□□□□□ -0.65
Ccdc116-201ENSMUST00000023452 Kdm5aQ3UXZ9 1690 aa10.96□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Abca6Q8K441 1624 aa10.96□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Hs1bp3Q3TC93 395 aa10.96□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Zbtb22Q9Z0G7 638 aa10.96□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 LifrP42703 1092 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Trim28Q62318 834 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Dnajc10Q9DC23 793 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Speer4bQ9D9F7 267 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gdpd2Q9ESM6 539 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 EvcP57680 1005 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Rrp12Q6P5B0 1295 aaKnown RBP10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Nlgn1Q99K10 843 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Il1rapl2Q9ERS6 686 aa10.95□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Kif4P33174 1231 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ddx11Q6AXC6 880 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Bag4Q8CI61 457 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 PsapQ61207 557 aaKnown RBP10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Slc35g1Q8BY79 368 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Bloc1s4Q8VED2 215 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Slc26a8Q8R0C3 999 aa10.94□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Anapc15P60007 132 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Map3k2Q61083 619 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 ShprhQ7TPQ3 1674 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm21663A0A0G2JE01 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm10093D3YYI8 482 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm7361D3Z6R1 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 5031410I06RikE9Q4E0 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm1979E9QAN3 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm5862K7N5V5 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm10220K7N660 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Hdac1O09106 482 aaKnown RBP10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Il4rP16382 810 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 GphnQ8BUV3 769 aaKnown RBP10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gm21680A0A0G2JGR8 267 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ddx17Q501J6 650 aaKnown RBP10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Rbm27Q5SFM8 1060 aaKnown RBP10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Pde3bQ61409 1100 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 IbspQ61711 324 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Dnajc5gQ8C632 165 aa10.93□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Zfyve16Q80U44 1528 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Top1mtQ8R4U6 593 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 NhsB1AV60 1647 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Nap1l3Q794H2 544 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ints3Q7TPD0 1041 aaKnown RBP10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ttc41Q692V3 1318 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 HdgfP51859 237 aaKnown RBP10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ccer1Q9CQL2 403 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Q9D9S1 216 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Atg4a-psA0A0G2JFS9 396 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Nucb1Q02819 459 aaKnown RBP10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 EappQ5BU09 281 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ltv1Q6NSQ7 470 aaKnown RBP10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Atg4aQ8C9S8 396 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Tmc1Q8R4P5 757 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 TefQ9JLC6 301 aa10.92□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gadd45bP22339 160 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gjb2Q00977 226 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Bicd2Q921C5 820 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Hoxc9P09633 260 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 AnlnQ8K298 1121 aaKnown RBP10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Gimap6Q8K349 305 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Sh3bgrQ9WUZ7 214 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 NpatQ8BMA5 1420 aa10.91□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 VgfQ0VGU4 617 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Zpr1Q62384 459 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Samm50Q8BGH2 469 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Edc3Q8K2D3 508 aaKnown RBP10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ddx54Q8K4L0 874 aaKnown RBP10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Sirt1Q923E4 737 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 CenppQ9CZ92 286 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Cnnm3Q32NY4 713 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Dzip1Q8BMD2 852 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Slc39a6Q8C145 765 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 RestQ8VIG1 1082 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Slx4ipQ9D7Y9 413 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Abca8bQ8K440 1620 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Igflr1Q3U4N7 345 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 GpkowQ56A08 488 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ttc19Q8CC21 365 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 4933402E13RikQ9D4D2 429 aa10.9□□□□□ -0.66
Ccdc116-201ENSMUST00000023452 Ercc3P49135 783 aa10.89□□□□□ -0.67
Ccdc116-201ENSMUST00000023452 Ddrgk1Q80WW9 315 aa10.89□□□□□ -0.67
Ccdc116-201ENSMUST00000023452 Olfml1Q8BSH2 233 aa10.89□□□□□ -0.67
Ccdc116-201ENSMUST00000023452 Rbm10Q99KG3 930 aaKnown RBP10.89□□□□□ -0.67
Ccdc116-201ENSMUST00000023452 Rrs1Q9CYH6 365 aaKnown RBP10.89□□□□□ -0.67
Ccdc116-201ENSMUST00000023452 Uggt2E9Q4X2 1504 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms