RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Kdm6bQ5NCY0 1641 aa15.08■□□□□ 0
Msh6-201ENSMUST00000005503 PhaxQ9JJT9 385 aaKnown RBP15.08■□□□□ 0
Msh6-201ENSMUST00000005503 Krt85Q9Z2T6 507 aa15.08■□□□□ 0
Msh6-201ENSMUST00000005503 Abcc6Q9R1S7 1498 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 AU022751B1B0V2 589 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Fyb1O35601 819 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Gabpb2P81069 414 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Dennd6aQ8BH65 605 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Ccdc178Q8CDV0 866 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Mmel1Q9JLI3 765 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Gm10471E9Q1C7 252 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Pabpn1Q8CCS6 302 aaKnown RBP15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Gcc2Q8CHG3 1679 aa15.07■□□□□ 0
Msh6-201ENSMUST00000005503 Stx6Q9JKK1 255 aa15.06■□□□□ 0
Msh6-201ENSMUST00000005503 Ppip5k1A2ARP1 1436 aa15.06■□□□□ 0
Msh6-201ENSMUST00000005503 Gzf1Q4VBD9 706 aa15.06■□□□□ 0
Msh6-201ENSMUST00000005503 BcanQ61361 883 aa15.06■□□□□ 0
Msh6-201ENSMUST00000005503 Prim1P20664 417 aa15.05■□□□□ 0
Msh6-201ENSMUST00000005503 Dhx16G3X8X0 1044 aaKnown RBP15.05■□□□□ -0
Msh6-201ENSMUST00000005503 Pdcl2Q78Y63 240 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 LlphQ9D945 130 aaKnown RBP15.05■□□□□ -0
Msh6-201ENSMUST00000005503 TimelessQ9R1X4 1197 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 Cfap99A0A140LIX9 648 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 Ccne1Q61457 408 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 Idi2Q8BFZ6 227 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 Map3k4O08648 1597 aa15.05■□□□□ -0
Msh6-201ENSMUST00000005503 PaskQ8CEE6 1383 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 Snx13Q6PHS6 957 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 Nsd3Q6P2L6 1439 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 CebpzP53569 1052 aaKnown RBP15.04■□□□□ -0
Msh6-201ENSMUST00000005503 Slc26a8Q8R0C3 999 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 SphkapQ6NSW3 1687 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 InsrP15208 1372 aa15.04■□□□□ -0
Msh6-201ENSMUST00000005503 Kif14L0N7N1 1674 aaKnown RBP15.04■□□□□ -0
Msh6-201ENSMUST00000005503 Cep57l1Q8VDS7 400 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Cyp27a1Q9DBG1 533 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Cul7Q8VE73 1689 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Aldh8a1Q8BH00 487 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Srek1Q8BZX4 494 aaKnown RBP15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Antxr1Q9CZ52 562 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Supt6hQ62383 1726 aaKnown RBP15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Zkscan16A2ALW2 728 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Cplx2P84086 134 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Chpf2Q3UU43 768 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Ift57Q8BXG3 429 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Strn4P58404 760 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Bms1Q6PGF5 1284 aaKnown RBP15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Il1rapl2Q9ERS6 686 aa15.03■□□□□ -0
Msh6-201ENSMUST00000005503 Kdm4cQ8VCD7 1054 aa15.02■□□□□ -0
Msh6-201ENSMUST00000005503 Stk38Q91VJ4 465 aa15.02■□□□□ -0
Msh6-201ENSMUST00000005503 Ppp6r3Q922D4 844 aa15.02■□□□□ -0
Msh6-201ENSMUST00000005503 Irgm2A0A140LIF8 407 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Zkscan7E9PVW1 718 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Cnnm1Q0GA42 951 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 PsapQ61207 557 aaKnown RBP15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Abca5Q8K448 1642 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Sass6Q80UK7 654 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Smc4Q8CG47 1286 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ttc21aQ8C0S4 1314 aa15.02□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ddx19aQ61655 478 aaKnown RBP15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ppp6r1Q7TSI3 856 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Pola1P33609 1465 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Edc4Q3UJB9 1406 aaKnown RBP15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Cfap73J3QPZ5 306 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Clcn1Q64347 994 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Fsd1Q7TPM6 496 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Mrps27Q8BK72 415 aaKnown RBP15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Adgrl2Q8JZZ7 1487 aa15.01□□□□□ -0.01
Msh6-201ENSMUST00000005503 Zap70P43404 618 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Anp32eP97822 260 aaKnown RBP15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ttc41Q692V3 1318 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ak9G3UYQ4 1894 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Ube2hP62257 183 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Zhx1P70121 873 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Naa30Q8CES0 364 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 RestQ8VIG1 1082 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 Polr3dQ91WD1 398 aa15□□□□□ -0.01
Msh6-201ENSMUST00000005503 P2rx7Q9Z1M0 595 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Mbd5B1AYB6 1498 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Prune1Q8BIW1 454 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Rsph6aQ8CDR2 708 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Wdr33Q8K4P0 1330 aaKnown RBP14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Igf1rQ60751 1373 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Pik3r4Q8VD65 1358 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Mns1Q61884 491 aa14.99□□□□□ -0.01
Msh6-201ENSMUST00000005503 Cfap58B2RW38 873 aa14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Tex2Q6ZPJ0 1128 aaKnown RBP14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Zmym3Q9JLM4 1370 aa14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Bach1P97302 739 aa14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Gigyf1Q99MR1 1044 aaKnown RBP14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Me1P06801 572 aa14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Btbd11Q6GQW0 1109 aa14.98□□□□□ -0.01
Msh6-201ENSMUST00000005503 Gm45015A0A140LII9 184 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Gm18336A0A140LIU8 765 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Cct4P80315 539 aaKnown RBP14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Fam43aQ8BUP8 424 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 AatkQ80YE4 1365 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Arid4aF8VPQ2 1261 aaKnown RBP14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Gm21969J3QJZ1 289 aa14.97□□□□□ -0.01
Msh6-201ENSMUST00000005503 Gtf2f1Q3THK3 508 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms