RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 ACBD4Q8NC06 268 aa11.55□□□□□ -0.56
SNRPF-205ENST00000553192 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
SNRPF-205ENST00000553192 ZNF501Q96CX3 271 aaPredicted RBP11.55□□□□□ -0.56
SNRPF-205ENST00000553192 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
SNRPF-205ENST00000553192 STAB1Q9NY15 2570 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 MAP1AP78559 2803 aaPredicted RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 TRGV8A0A0C4DH27 118 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 TTC24A2A3L6 582 aaPredicted RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CCDC78A2IDD5 438 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CCL21O00585 134 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 HTRA2O43464 458 aaPredicted RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 JCHAINP01591 159 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 KLK3P07288 261 aaPredicted RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 OTX2P32243 289 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 USP8P40818 1118 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 SOX8P57073 446 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 SNX16P57768 344 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 ADORA2A-AS1P86434 159 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CETN1Q12798 172 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 PAK1Q13153 545 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 C15orf59Q2T9L4 293 aaPredicted RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 PLEKHA7Q6IQ23 1121 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 TMEM126BQ8IUX1 230 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 UMODL1-AS1Q8N2C9 162 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 AVL9Q8NBF6 648 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 AP2M1Q96CW1 435 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 ZDHHC12Q96GR4 267 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 RAB33BQ9H082 229 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CXXC4Q9H2H0 198 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 LRRC19Q9H756 370 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 OLAHQ9NV23 265 aa11.54□□□□□ -0.56
SNRPF-205ENST00000553192 CNOT6Q9ULM6 557 aaKnown RBP11.54□□□□□ -0.56
SNRPF-205ENST00000553192 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 ASMTLO95671 621 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 VIPP01282 170 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 EPHB2P29323 1055 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 PBX1P40424 430 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
SNRPF-205ENST00000553192 GSDMDP57764 484 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 APBA1Q02410 837 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 LTBQ06643 244 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 CDC16Q13042 620 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 GPR19Q15760 415 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 CDO1Q16878 200 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 CCDC14Q49A88 953 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 C8orf34Q49A92 452 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 XKRXQ6PP77 449 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 IGFL2Q6UWQ7 119 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 RAB43Q86YS6 212 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 D2HGDHQ8N465 521 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 PAF1Q8N7H5 531 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 SPATA3Q8NHX4 192 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 CHTF18Q8WVB6 975 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 UBXN4Q92575 508 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 SNX21Q969T3 373 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 MTFMTQ96DP5 389 aaKnown RBP11.53□□□□□ -0.56
SNRPF-205ENST00000553192 FER1L6-AS2Q96M78 137 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 TSG101Q99816 390 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 TMEM121Q9BTD3 319 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 KCND1Q9NSA2 647 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 PCMTD2Q9NV79 361 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 VPS18Q9P253 973 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 PCDHGC4Q9Y5F7 938 aa11.53□□□□□ -0.56
SNRPF-205ENST00000553192 KLF7O75840 302 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 BRAFP15056 766 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 CMA1P23946 247 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 CDH5P33151 784 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 CA7P43166 264 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 SCNN1BP51168 640 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 CLCNKAP51800 687 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 IST1P53990 364 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 TUBB4BP68371 445 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 NSUN2Q08J23 767 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 FOXD4Q12950 439 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ABRQ12979 859 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 TUBB2AQ13885 445 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 GPR18Q14330 331 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ZNF169Q14929 603 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 NCF4Q15080 339 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ASIC2Q16515 512 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 B3GNTL1Q67FW5 361 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ENOSF1Q7L5Y1 443 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ARCQ7LC44 396 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 NLRP8Q86W28 1048 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 CLEC1AQ8NC01 280 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 DNAJB14Q8TBM8 379 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 SMIM14Q96QK8 99 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 MCCC1Q96RQ3 725 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-205ENST00000553192 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 ENKD1Q9H0I2 346 aa11.52□□□□□ -0.57
SNRPF-205ENST00000553192 SLC40A1Q9NP59 571 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms