RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 HLA-CQ95604 372 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 REEP2Q9BRK0 252 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SPATA7Q9P0W8 599 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MAGEL2Q9UJ55 1249 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PCDHA3Q9Y5H8 950 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 A0A087X1B8 175 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GTPBP1O00178 669 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 FOXD2O60548 495 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 FGF19O95750 216 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 AP2A1O95782 977 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ICAM1P05362 532 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 EPORP19235 508 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 LCN1P31025 176 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CDKN2CP42773 168 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MFSD10Q14728 455 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CDK10Q15131 360 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SPANXN3Q5MJ09 141 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 HYIQ5T013 277 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CNKSR3Q6P9H4 555 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 FRRS1Q6ZNA5 592 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NYAP1Q6ZVC0 841 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 USP51Q70EK9 711 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 OTOP3Q7RTS5 596 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 TIGD4Q8IY51 512 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 DSELQ8IZU8 1212 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 C1orf216Q8TAB5 229 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PIWIL2Q8TC59 973 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PPP3R2Q96LZ3 170 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PANX3Q96QZ0 392 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 EIF2AK1Q9BQI3 630 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 DDIT4Q9NX09 232 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 KCTD5Q9NXV2 234 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 UBQLN2Q9UHD9 624 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PGAP2Q9UHJ9 254 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 AP4E1Q9UPM8 1137 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PLEKHA6Q9Y2H5 1048 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 Q9Y3F1 56 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 LMO7Q8WWI1 1683 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 BORCS7-ASMTA0A0B4J1R7 106 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ILVBLA1L0T0 632 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 BCKDKO14874 412 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SCGB1D2O95969 90 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 APOC3P02656 99 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 RPLP0P05388 317 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 OR56A5P0C7T3 313 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 EPCAMP16422 314 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GNB3P16520 340 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PGAM1P18669 254 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 TAF6P49848 677 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CTBP2P56545 445 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 DEFA6Q01524 100 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 GNA12Q03113 381 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CDH17Q12864 832 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SNRNP35Q16560 246 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 MGAT5BQ3V5L5 792 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF550Q7Z398 422 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ITIH5Q86UX2 942 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 KCNMB4Q86W47 210 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 METTL25Q8N6Q8 603 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 RNF149Q8NC42 400 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 SELENOMQ8WWX9 145 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PGM2Q96G03 612 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 NFKBIZQ9BYH8 718 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 COMMD4Q9H0A8 199 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 DPAGT1Q9H3H5 408 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PCDH9Q9HC56 1237 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM8AQ9HCN3 771 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 DCP1AQ9NPI6 582 aaPredicted RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 CFAP97Q9P2B7 532 aa7.2□□□□□ -1.26
CTNND1-216ENST00000527467 PIN4Q9Y237 131 aaKnown RBP7.2□□□□□ -1.26
CTNND1-216ENST00000527467 RBM47A0AV96 593 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF705EA8MWA4 302 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 M0QYT0 321 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SNX3O60493 162 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FBXO21O94952 628 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RASGRP1O95267 797 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ITGA4P13612 1032 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CXCR2P25025 360 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 GNALP38405 381 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RORCP51449 518 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RCAN1P53805 252 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 CCL23P55773 120 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 TAS2R41P59536 307 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 RASGEF1BQ0VAM2 473 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 FAM91A1Q658Y4 838 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZCCHC12Q6PEW1 402 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF782Q6ZMW2 699 aaPredicted RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 KATNAL2Q8IYT4 538 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 BRSK1Q8TDC3 778 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ARMC5Q96C12 935 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 STRBPQ96SI9 672 aaKnown RBP7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ANKZF1Q9H8Y5 726 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 C4AP0C0L4 1744 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 BTN3A1O00481 513 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 ZBTB14O43829 449 aa7.19□□□□□ -1.26
CTNND1-216ENST00000527467 UGT2B17O75795 530 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms