RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ATP1A4Q13733 1029 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 KCNAB1Q14722 419 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 ACOX1Q15067 660 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PTPRRQ15256 657 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PTPN20Q4JDL3 420 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 TMCO4Q5TGY1 634 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 IZUMO3Q5VZ72 239 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 DOK6Q6PKX4 331 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 CERS6Q6ZMG9 384 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 SPOCD1Q6ZMY3 1216 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 RFLNAQ6ZTI6 216 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 DPPA4Q7L190 304 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 MRGPRGQ86SM5 289 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PHLDB2Q86SQ0 1253 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PPP1R3BQ86XI6 285 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PRIMA1Q86XR5 153 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 TMEM102Q8N9M5 508 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 ACBD4Q8NC06 268 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 FAR1Q8WVX9 515 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 C14orf79Q96F83 325 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 CCDC120Q96HB5 630 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 TGM7Q96PF1 710 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 OR2M4Q96R27 311 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 SLC30A3Q99726 388 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 SLX1AQ9BQ83 275 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 CHST8Q9H2A9 424 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 DLL4Q9NR61 685 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 AGPAT4Q9NRZ5 378 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 TMEM248Q9NWD8 314 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 PCDHA7Q9UN72 937 aa8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 RPH3AQ9Y2J0 694 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC9-212ENST00000521944 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 FAM221AA4D161 298 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TMEM200CA6NKL6 621 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ELOA3DA6NLF2 546 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 SHISA8B8ZZ34 492 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 RASA4BC9J798 803 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TRAFD1O14545 582 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 CETN3O15182 167 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PMM2O15305 246 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TOX3O15405 576 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 RASA4O43374 803 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 THAP12O43422 761 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 RAMP2O60895 175 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 FLT3P36888 993 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ETFBP38117 255 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ETV3P41162 512 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 MAPKAPK2P49137 400 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 VAV2P52735 878 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PMS1P54277 932 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PPP1CAP62136 330 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 UBE2IP63279 158 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PEX6Q13608 980 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 RABEP1Q15276 862 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 CNGA3Q16281 694 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 SLC25A52Q3SY17 297 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ELOA3BQ3SY89 546 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 VWA2Q5GFL6 755 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 MED25Q71SY5 747 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PRSS42Q7Z5A4 293 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 HSD11B1LQ7Z5J1 315 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TRIM74Q86UV6 250 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 FAM131BQ86XD5 332 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TREML1Q86YW5 311 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PASD1Q8IV76 773 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 ELOA3Q8NG57 546 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 HDAC11Q96DB2 347 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 NUS1Q96E22 293 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 MCCC2Q9HCC0 563 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TMEM63CQ9P1W3 806 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 CPNE7Q9UBL6 633 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 MKL2Q9ULH7 1088 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 HPCAL4Q9UM19 191 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 PRKAB1Q9Y478 270 aa8.74□□□□□ -1.01
TRAPPC9-212ENST00000521944 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 IGHV5-51A0A0C4DH38 117 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 A0A0U1RQS6 177 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 LILRA5A6NI73 299 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 BECN2A8MW95 431 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 DNAJC6O75061 913 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 LRIG2O94898 1065 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 LHCGRP22888 699 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 KCNK10P57789 538 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 NRG1Q02297 640 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 CUL4AQ13619 759 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 PLEKHS1Q5SXH7 462 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 ACBD5Q5T8D3 534 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 PRAMEF17Q5VTA0 474 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 LYPLAL1Q5VWZ2 237 aa8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 ZNF324BQ6AW86 544 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 C1orf229Q6ZS94 237 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-212ENST00000521944 Q6ZVL8 140 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms