RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 MITD1Q8WV92 249 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 TMX3Q96JJ7 454 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 APOLD1Q96LR9 279 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 S1PR5Q9H228 398 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 KCNK4Q9NYG8 393 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 HCN3Q9P1Z3 774 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 MGAT4CQ9UBM8 478 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 WNT16Q9UBV4 365 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PEF1Q9UBV8 284 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 DCDC2Q9UHG0 476 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC24A2Q9UI40 661 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 CDYLQ9Y232 598 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 RNF215Q9Y6U7 377 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PTCH1Q13635 1447 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 RNF17Q9BXT8 1623 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ARAP3Q8WWN8 1544 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 AGPSO00116 658 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 MEIS1O00470 390 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 SSX5O60225 188 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 LCA5LO95447 670 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 CFIP05156 583 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 C1SP09871 688 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 STAG3L2P0CL84 134 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 INSRRP14616 1297 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 CCND3P30281 292 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ARL1P40616 181 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 GPD2P43304 727 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ALDH1A3P47895 512 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC6A9P48067 706 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 SRP54P61011 504 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 B4GALNT1Q00973 533 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 PDE1BQ01064 536 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 GSTM4Q03013 218 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 MSLNQ13421 630 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 DYRK1AQ13627 763 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 CHERPQ8IWX8 916 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 CADM3Q8N126 398 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 C12orf50Q8NA57 414 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 TP53I13Q8NBR0 393 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 TCP11Q8WWU5 503 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 MISP3Q96FF7 219 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ZSWIM3Q96MP5 696 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 INSM2Q96T92 566 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 CCM2Q9BSQ5 444 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 PKIBQ9C010 78 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF275Q9NSD4 429 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 PDP1Q9P0J1 537 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 HESX1Q9UBX0 185 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 TRIM10Q9UDY6 481 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF510Q9Y2H8 683 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 PADI2Q9Y2J8 665 aa7.45□□□□□ -1.22
PDGFRA-206ENST00000508170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 TCAF2A6NFQ2 919 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 NPIPB13A6NJU9 1138 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 NPIPB4C9JG80 1138 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SNAP23O00161 211 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 TLR4O00206 839 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SOX1O00570 391 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 ARHGAP33O14559 1287 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 DCXO43602 365 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 AVILO75366 819 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 NDUFS6O75380 124 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SAP30O75446 220 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 CTSBP07858 339 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 HMBSP08397 361 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SBK2P0C263 348 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 CPB1P15086 417 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 HOXB8P17481 243 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 ATP6V1C1P21283 382 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 HTR7P34969 479 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 GPR15P49685 360 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 GRIN1Q05586 938 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 KCNAB1Q14722 419 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 TMEM31Q5JXX7 168 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 Q6ZVU0 165 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 MED25Q71SY5 747 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 TRMT11Q7Z4G4 463 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 GPR137CQ8N3F9 429 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF781Q8N8C0 355 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 CLEC1AQ8NC01 280 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 B4GALNT2Q8NHY0 566 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC20A1Q8WUM9 679 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 OXNAD1Q96HP4 312 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 KLHL15Q96M94 604 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC12A9Q9BXP2 914 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 BLZF1Q9H2G9 400 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 GOLPH3LQ9H4A5 285 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 OSGEPL1Q9H4B0 414 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 RIOX1Q9H6W3 641 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 KCNK12Q9HB15 430 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 MMP25Q9NPA2 562 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 PPANQ9NQ55 473 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 NCKAP1Q9Y2A7 1128 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 EDDM13A0A1B0GTR0 161 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 C17orf102A2RUQ5 167 aa7.44□□□□□ -1.22
PDGFRA-206ENST00000508170 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms