RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 IRF2BP2Q7Z5L9 587 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 PPP1R3BQ86XI6 285 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 PSTKQ8IV42 348 aaKnown RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 PARP9Q8IXQ6 854 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 SIDT2Q8NBJ9 832 aaKnown RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 KCTD6Q8NC69 237 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 CPT1CQ8TCG5 803 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 CT55Q8WUE5 264 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 SCARF2Q96GP6 870 aaPredicted RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 COX14Q96I36 57 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 PLEKHG4BQ96PX9 1271 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 ERGIC2Q96RQ1 377 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 MLPHQ9BV36 600 aaPredicted RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 ACSS2Q9NR19 701 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 ANO10Q9NW15 660 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 SCHIP1Q9P0W5 487 aaPredicted RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 VPS18Q9P253 973 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 FAM8A1Q9UBU6 413 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 PLEKHB1Q9UF11 243 aaPredicted RBP8.14□□□□□ -1.11
SNF8-204ENST00000506104 ANAPC7Q9UJX3 599 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 KCND3Q9UK17 655 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 RARRES3Q9UL19 164 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 DNPEPQ9ULA0 475 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 PADI1Q9ULC6 663 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 SLC30A1Q9Y6M5 507 aa8.14□□□□□ -1.11
SNF8-204ENST00000506104 A6NL46 340 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 OR52A4PA6NMU1 304 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 DDX3YO15523 660 aaKnown RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 NUAK1O60285 661 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 SPAG6O75602 509 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 CREG1O75629 220 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 HLA-DQB2P05538 268 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 CD48P09326 243 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 MYBL1P10243 752 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 ATP1A3P13637 1013 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 IL4RP24394 825 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PCK1P35558 622 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 GARSP41250 739 aaKnown RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 SPINT3P49223 89 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PGDP52209 483 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PDE1BQ01064 536 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 TUBB3Q13509 450 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 GTF2H3Q13889 308 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 KCNAB1Q14722 419 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PLCL1Q15111 1095 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 IFI16Q16666 785 aaKnown RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 HADHQ16836 314 aaKnown RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 NADK2Q4G0N4 442 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 TCTN3Q6NUS6 607 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 FAM199XQ6PEV8 388 aaPredicted RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 TRAPPC5Q8IUR0 188 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 CBARPQ8N350 705 aaPredicted RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 AVL9Q8NBF6 648 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 RSC1A1Q92681 617 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 MR1Q95460 341 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 ZNF830Q96NB3 372 aaPredicted RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 TTC25Q96NG3 672 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 RUFY1Q96T51 708 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 SLC25A23Q9BV35 468 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 TDRD1Q9BXT4 1180 aaKnown RBP8.13□□□□□ -1.11
SNF8-204ENST00000506104 CEP41Q9BYV8 373 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 GPR63Q9BZJ6 419 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 EPB41L1Q9H4G0 881 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 RMI1Q9H9A7 625 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 BPIFA1Q9NP55 256 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PDE7BQ9NP56 450 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 PDP2Q9P2J9 529 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 IP6K2Q9UHH9 426 aa8.13□□□□□ -1.11
SNF8-204ENST00000506104 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 BOD1L1Q8NFC6 3051 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CCDC88CQ9P219 2028 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 MN1Q10571 1320 aaPredicted RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 LILRA5A6NI73 299 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 DDX3XO00571 662 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNF8-204ENST00000506104 KMOO15229 486 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 MATN3O15232 486 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 FZD6O60353 706 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 JCHAINP01591 159 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 MT-ND3P03897 115 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 PDGFAP04085 211 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ZNF7P17097 686 aaPredicted RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 IDSP22304 550 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CES1P23141 567 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 SLC19A1P41440 591 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 HALP42357 657 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 PMS2P54278 862 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 RPS15P62841 145 aaKnown RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 NIPAL4Q0D2K0 466 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 AP1B1Q10567 949 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 MAP7Q14244 749 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 GPR18Q14330 331 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 PIGHQ14442 188 aaPredicted RBP8.12□□□□□ -1.11
SNF8-204ENST00000506104 KYNUQ16719 465 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 QPCTQ16769 361 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ATP13A4Q4VNC1 1196 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CPZQ66K79 652 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 CCDC70Q6NSX1 233 aa8.12□□□□□ -1.11
SNF8-204ENST00000506104 ARMC6Q6NXE6 501 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms