RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GPR34Q9UPC5 381 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 EXO1Q9UQ84 846 aaKnown RBP3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 CMAHPQ9Y471 501 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ABCA5Q8WWZ7 1642 aa3.73□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF644Q9H582 1327 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 LAMC3Q9Y6N6 1575 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SOGA1O94964 1423 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 A0A1W2PP11 408 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 IKBKBO14920 756 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 TSPAN9O75954 239 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 TPPPO94811 219 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 CLTBP09497 229 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 HOXB6P17509 224 aaKnown RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SPOCK1Q08629 439 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 EPS8Q12929 822 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 IKQ13123 557 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF234Q14588 700 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 MVPQ14764 893 aaKnown RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SYT16Q17RD7 645 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 KRTCAP3Q53RY4 240 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 WBP2NLQ6ICG8 309 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 UNQ6126/PRO20091Q6UXV3 157 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 CLEC17AQ6ZS10 378 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 C18orf65Q6ZTR6 163 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SZRD1Q7Z422 152 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 GPR180Q86V85 440 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 ODF3L1Q8IXM7 274 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 RFLNBQ8N5W9 214 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 C1orf131Q8NDD1 294 aaKnown RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLC20A1Q8WUM9 679 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 MOAP1Q96BY2 351 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 CDCA5Q96FF9 252 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 PCYT2Q99447 389 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 PKP4Q99569 1192 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SDF4Q9BRK5 362 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 KRTAP1-5Q9BYS1 174 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF556Q9HAH1 456 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 HAUS2Q9NVX0 235 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 MAP3K20Q9NYL2 800 aaKnown RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 KCNS2Q9ULS6 477 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 KLHL20Q9Y2M5 609 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 LRP12Q9Y561 859 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 DNMBPQ6XZF7 1577 aa3.72□□□□□ -1.81
HMGB1P11-201ENST00000413899 CTTNBP2Q8WZ74 1663 aa3.71□□□□□ -1.81
HMGB1P11-201ENST00000413899 A0A1W2PR77 199 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMEM8BA6NDV4 472 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 CLGNO14967 610 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMCC2O75069 709 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 GPC4O75487 556 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 MYOD1P15172 320 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 MSH2P43246 934 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 MMP14P50281 582 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 RRP1P56182 461 aaKnown RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 EEF1A1P68104 462 aaKnown RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 MRPS5P82675 430 aaKnown RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 POU3F1Q03052 451 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TROAPQ12815 778 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 CDC16Q13042 620 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 CUL4AQ13619 759 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 RAB6CQ53S08 254 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 EEF1A1P5Q5VTE0 462 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TPRG1Q6ZUI0 275 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 ASB18Q6ZVZ8 466 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 Q75L30 129 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMTC2Q8N394 836 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 RASGEF1CQ8N431 466 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 GCSAMQ8N6F7 178 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 HMGCLL1Q8TB92 370 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 LRRC59Q96AG4 307 aaKnown RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 TTC14Q96N46 770 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 NUDCD1Q96RS6 583 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 RAB6CQ9H0N0 254 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 EVA1AQ9H8M9 152 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 KCNG2Q9UJ96 466 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 FBXO2Q9UK22 296 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF215Q9UL58 517 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 DLGAP4Q9Y2H0 992 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 PBRM1Q86U86 1689 aa3.71□□□□□ -1.82
HMGB1P11-201ENST00000413899 ERICH3Q5RHP9 1530 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 NESP48681 1621 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRAC2D3DTV9 90 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 H3BQ06 376 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 PAPSS1O43252 624 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 MITFO75030 526 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 LDB3O75112 727 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 KRT36O76013 467 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 GFPT2O94808 682 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CSH1P0DML2 217 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 CSH2P0DML3 217 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 SELLP14151 372 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 ITGA2P17301 1181 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 KCNA5P22460 613 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 GNL1P36915 607 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
HMGB1P11-201ENST00000413899 RUNX1T1Q06455 604 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms