RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C6orf141Q5SZD1 244 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MARC1Q5VT66 337 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 IGFN1Q86VF2 1251 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ZFAND4Q86XD8 727 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 GPC2Q8N158 579 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 FBXO39Q8N4B4 442 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ABHD11Q8NFV4 315 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MUL1Q969V5 352 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MYLPFQ96A32 169 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SH3YL1Q96HL8 342 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 RNF145Q96MT1 663 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 GORASP2Q9H8Y8 452 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 COMMD8Q9NX08 183 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MARCH4Q9P2E8 410 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 GIMAP2Q9UG22 337 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PCDHGB1Q9Y5G3 927 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 C1orf232A0A0U1RR37 186 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 LCHNA4D1U4 455 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PPP6CO00743 305 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ADAM23O75077 832 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 C1RP00736 705 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 NCK1P16333 377 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 BDNFP23560 247 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ELK4P28324 431 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 EEF1DP29692 281 aaKnown RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SHMT2P34897 504 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 GRIK1P39086 918 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 YAP1P46937 504 aaKnown RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ARSDP51689 593 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 YBX1P67809 324 aaKnown RBP11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CHRNB3Q05901 458 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PRKG2Q13237 762 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ITGADQ13349 1161 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 IL18R1Q13478 541 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 TYSND1Q2T9J0 566 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SIRPB2Q5JXA9 342 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PIM3Q86V86 326 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 IFNEQ86WN2 208 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ZNF555Q8NEP9 628 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 GPRC5AQ8NFJ5 357 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 OR8J3Q8NGG0 315 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM40Q8WWA1 233 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 TMBIM1Q969X1 311 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CSF3RQ99062 836 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 DNAJB9Q9UBS3 223 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 ENPP5Q9UJA9 477 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 PTGDR2Q9Y5Y4 395 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 CPQQ9Y646 472 aa11.33□□□□□ -0.6
CAPN9-202ENST00000354537 H3BMM5 538 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 J3QRK9 145 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 TBC1D4O60343 1298 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 RPP40O75818 363 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 SOAT2O75908 522 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ATXN1LP0C7T5 689 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 RHOQP17081 205 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 GGT1P19440 569 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 HLA-DPA1P20036 260 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CD9P21926 228 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CD86P42081 329 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NOMO2Q5JPE7 1267 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 KDELC2Q7Z4H8 507 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 R3HCC1LQ7Z5L2 792 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CTU1Q7Z7A3 348 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ZDHHC13Q8IUH4 622 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 VPS33AQ96AX1 596 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 FBXL8Q96CD0 374 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 SEPHS2Q99611 448 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NT5MQ9NPB1 228 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 HEBP1Q9NRV9 189 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NDFIP2Q9NV92 336 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 PDE10AQ9Y233 779 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CNOT3O75175 753 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 GMNNO75496 209 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NTRK1P04629 796 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 FGF1P05230 155 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 APLP1P51693 650 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 UFM1P61960 85 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 TRIM32Q13049 653 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 BFSP2Q13515 415 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 EML3Q32P44 896 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ZC3H12BQ5HYM0 836 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CRTC3Q6UUV7 619 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 NKAPQ8N5F7 415 aaKnown RBP11.32□□□□□ -0.6
CAPN9-202ENST00000354537 OR56A4Q8NGH8 313 aa11.32□□□□□ -0.6
CAPN9-202ENST00000354537 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms