RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 DPH5Q9H2P9 285 aa13.8□□□□□ -0.2
SEC13-202ENST00000350697 CAAP1Q9H8G2 361 aa13.8□□□□□ -0.2
SEC13-202ENST00000350697 TREX1Q9NSU2 369 aa13.8□□□□□ -0.2
SEC13-202ENST00000350697 UCKL1Q9NWZ5 548 aa13.8□□□□□ -0.2
SEC13-202ENST00000350697 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
SEC13-202ENST00000350697 ATXN10Q9UBB4 475 aa13.8□□□□□ -0.2
SEC13-202ENST00000350697 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
SEC13-202ENST00000350697 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TRBV5-4A0A0C4DH59 114 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TM4SF5O14894 197 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 SCAMP1O15126 338 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TP73O15350 636 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 NUAK1O60285 661 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 DNAJC6O75061 913 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 MTX2O75431 263 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 CDK14O94921 469 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 GOT2P00505 430 aaKnown RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 NMBRP28336 390 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 CA5AP35218 305 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TMEM115Q12893 351 aaPredicted RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 C1orf61Q13536 156 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 KHDC1Q4VXA5 237 aaKnown RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 PYCR3Q53H96 274 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 FNBP1LQ5T0N5 605 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 ZNF648Q5T619 568 aaPredicted RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 AFTPHQ6ULP2 937 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 GALNT13Q8IUC8 556 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 NOA1Q8NC60 698 aaKnown RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC13-202ENST00000350697 MFSD3Q96ES6 412 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 OR2M4Q96R27 311 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 TMEM168Q9H0V1 697 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 ZNHIT2Q9UHR6 403 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 MAD1L1Q9Y6D9 718 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 SPTBN4Q9H254 2564 aa13.79□□□□□ -0.2
SEC13-202ENST00000350697 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
SEC13-202ENST00000350697 PCNX2A6NKB5 2137 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 LMO7DNF2Z398 122 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 CHUKO15111 745 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 SH3BP5O60239 455 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 ALPPL2P10696 532 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 ZNF8P17098 575 aaPredicted RBP13.78□□□□□ -0.2
SEC13-202ENST00000350697 MSH3P20585 1137 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 AKT1P31749 480 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 FOXN2P32314 431 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
SEC13-202ENST00000350697 ARL4CP56559 192 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 GTF2H3Q13889 308 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 HIF1AQ16665 826 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 GLE1Q53GS7 698 aaKnown RBP13.78□□□□□ -0.2
SEC13-202ENST00000350697 PSAPL1Q6NUJ1 521 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 CES3Q6UWW8 571 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 TAS2R42Q7RTR8 314 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 PIP4P1Q86T03 277 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
SEC13-202ENST00000350697 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 RHBDD1Q8TEB9 315 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 SETD7Q8WTS6 366 aaKnown RBP13.78□□□□□ -0.2
SEC13-202ENST00000350697 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 STAMBPL1Q96FJ0 436 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 COPS8Q99627 209 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 CLPBQ9H078 707 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 ZDHHC3Q9NYG2 299 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 GRHL1Q9NZI5 618 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 BTBD3Q9Y2F9 522 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 BPTFQ12830 3046 aa13.78□□□□□ -0.2
SEC13-202ENST00000350697 OR51F1A6NGY5 319 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 CFAP99D6REC4 459 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 TPP1O14773 563 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 FFAR2O15552 330 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 GRID2O43424 1007 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 ANXA6P08133 673 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 PRSS56P0CW18 603 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 RALBP11234 206 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 PAMP19021 973 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 CSRP1P21291 193 aaKnown RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 ACRV1P26436 265 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 CDKN1CP49918 316 aaPredicted RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 SLC7A5Q01650 507 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 CAV1Q03135 178 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 DHX9Q08211 1270 aaKnown RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 ILF3Q12906 894 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■□□ 15.7
SEC13-202ENST00000350697 LRP8Q14114 963 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 BBS9Q3SYG4 887 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 ANKRD20A4Q4UJ75 823 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 MSS51Q4VC12 460 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 KIAA0930Q6ICG6 404 aaPredicted RBP13.77□□□□□ -0.21
SEC13-202ENST00000350697 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 TAF8Q7Z7C8 310 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
SEC13-202ENST00000350697 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms