RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PRKG2Q13237 762 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NAB1Q13506 487 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ARHGEF7Q14155 803 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 GRB7Q14451 532 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SF3B4Q15427 424 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 MAPKAPK3Q16644 382 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 WSCD1Q658N2 575 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NANOGP8Q6NSW7 305 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CXCL17Q6UXB2 119 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TTC39CQ8N584 583 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NIPA2Q8N8Q9 360 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ZFP90Q8TF47 636 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 MINDY3Q9H8M7 445 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 PNPLA8Q9NP80 782 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TOR4AQ9NXH8 423 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 KIAA1257Q9ULG3 409 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 USP22Q9UPT9 525 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SSC5DA1L4H1 1573 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TCAF2A6NFQ2 919 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 H3BRB1 525 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 GRID2O43424 1007 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TMCC2O75069 709 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 FKTNO75072 461 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 RECQL4O94761 1208 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CNPP09543 421 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 HOXC6P09630 235 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SLC2A3P11169 496 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 COL6A1P12109 1028 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CDH1P12830 882 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ARF4P18085 180 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ARRB2P32121 409 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SOAT1P35610 550 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 WNT3AP56704 352 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 RPS3AP61247 264 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SP2Q02086 613 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 PLA2G4EQ3MJ16 856 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NOL9Q5SY16 702 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 HECTD2Q5U5R9 776 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SDHAF4Q5VUM1 108 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF57Q68EA5 555 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TLK2Q86UE8 772 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 PIK3C3Q8NEB9 887 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TRPV3Q8NET8 790 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NPLOC4Q8TAT6 608 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SLC47A1Q96FL8 570 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TEKT5Q96M29 485 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NSUN5Q96P11 429 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TSSK3Q96PN8 268 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 FUNDC2Q9BWH2 189 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 MYO10Q9HD67 2058 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 OLAHQ9NV23 265 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SUCOQ9UBS9 1254 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 EIF3LQ9Y262 564 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CARD8Q9Y2G2 431 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 FAM32AQ9Y421 112 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CORINQ9Y5Q5 1042 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 QSER1Q2KHR3 1735 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 PIPSLA2A3N6 862 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 HMX2A2RU54 273 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ZSCAN5BA6NJL1 495 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 AIREO43918 545 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 HBP1O60381 514 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 B3GAT3O94766 335 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 MATN1P21941 496 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 XPAP23025 273 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 TUBA4AP68366 448 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NPTX1Q15818 432 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 RNASE12Q5GAN4 147 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 C1QTNF12Q5T7M4 302 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 LCLAT1Q6UWP7 414 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ZC3HC1Q86WB0 502 aaKnown RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 RIOX2Q8IUF8 465 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CEP97Q8IW35 865 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ADHFE1Q8IWW8 467 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CRYGNQ8WXF5 182 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 LRRC58Q96CX6 371 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 VAT1Q99536 393 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 NPLQ9BXD5 320 aaPredicted RBP7.48□□□□□ -1.21
CDHR3-201ENST00000317716 MROH8Q9H579 483 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 LTB4R2Q9NPC1 389 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 ERAP1Q9NZ08 941 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 KCNH4Q9UQ05 1017 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 CNTN6Q9UQ52 1028 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SPEF1Q9Y4P9 236 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 LRRC37AA6NMS7 1700 aa7.48□□□□□ -1.21
CDHR3-201ENST00000317716 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 EFCAB9A8MZ26 197 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PPP6CO00743 305 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ENPP3O14638 875 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 TLR5O60602 858 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ADAM23O75077 832 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 SNX4O95219 450 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 BMP10O95393 424 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 ALDH1A1P00352 501 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 PABPC1P11940 636 aaKnown RBP7.47□□□□□ -1.21
CDHR3-201ENST00000317716 AGXTP21549 392 aa7.47□□□□□ -1.21
CDHR3-201ENST00000317716 IGFBP5P24593 272 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms