RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ATL2Q8NHH9 583 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 DNAJC1Q96KC8 554 aaKnown RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 OR2M4Q96R27 311 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 LRRC40Q9H9A6 602 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 RAB6BQ9NRW1 208 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 SMOXQ9NWM0 555 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.57□□□□□ -0.241e-9■□□□□ 10.2
VEGFA-201ENST00000230480 SCHIP1Q9P0W5 487 aaPredicted RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 TBC1D29Q9UFV1 150 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 SLC2A6Q9UGQ3 507 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 MOSPD1Q9UJG1 213 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 PKD1L2Q7Z442 2459 aa13.57□□□□□ -0.24
VEGFA-201ENST00000230480 URB1O60287 2271 aaKnown RBP13.57□□□□□ -0.24
VEGFA-201ENST00000230480 GLYATL1P3A0A0U1RQE8 302 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CPED1A4D0V7 1026 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 H7C0S8 307 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CES2O00748 559 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 PPM1DO15297 605 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF189O75820 626 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 SLC25A14O95258 325 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 FDFT1P37268 417 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 PTGIRP43119 386 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 MAGEA6P43360 314 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 TMPRSS15P98073 1019 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CFHR1Q03591 330 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 KCNJ11Q14654 390 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 POU6F1Q14863 301 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 TRIP13Q15645 432 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 GPRC6AQ5T6X5 926 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 GKN2Q86XP6 184 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 ARL10Q8N8L6 244 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 FAM46DQ8NEK8 389 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 DDHD1Q8NEL9 900 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 ZNF398Q8TD17 642 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CDKN2AIPNLQ96HQ2 116 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 C19orf43Q9BQ61 176 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 FAM96AQ9H5X1 160 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 NLE1Q9NVX2 485 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-201ENST00000230480 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 RNF215Q9Y6U7 377 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 AHCTF1Q8WYP5 2266 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 CELSR3Q9NYQ7 3312 aa13.56□□□□□ -0.24
VEGFA-201ENST00000230480 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 PRAMEF33A0A0G2JMD5 474 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 PMS2P1A4D2B8 440 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 OR51F1A6NGY5 319 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 STX7O15400 261 aaKnown RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 GRID2O43424 1007 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 KIF5CO60282 957 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ASMTLO95671 621 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ECEL1O95672 775 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 GP1BAP07359 652 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ALPPL2P10696 532 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 BRAFP15056 766 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 IVDP26440 423 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 DAB2P98082 770 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ACVR1Q04771 509 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 NR0B2Q15466 257 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 SLC30A9Q6PML9 568 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 FAM83HQ6ZRV2 1179 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 CHST15Q7LFX5 561 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 CACTIN-AS1Q8N1I8 211 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ARL14Q8N4G2 192 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC74AQ96AQ1 378 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 FERMT1Q9BQL6 677 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 PAK5Q9P286 719 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 FEZ2Q9UHY8 353 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-201ENST00000230480 KCNK6Q9Y257 313 aa13.55□□□□□ -0.24
VEGFA-201ENST00000230480 ZFHX4Q86UP3 3567 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 IGLV3-16A0A075B6K0 115 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CCDC78A2IDD5 438 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 ERI2A8K979 691 aaKnown RBP13.54□□□□□ -0.24
VEGFA-201ENST00000230480 TP73O15350 636 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 PSMD3O43242 534 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 PPFIA2O75334 1257 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 TMEM63AO94886 807 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 MT-CO3P00414 261 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 ACP5P13686 325 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CLCNKAP51800 687 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 GNG11P61952 73 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CCL7P80098 99 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 TARDBPQ13148 414 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■■■□ 20.1
VEGFA-201ENST00000230480 NFATC2Q13469 925 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 SEMA3AQ14563 771 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 NR1D2Q14995 579 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 ST3GAL2Q16842 350 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 C14orf28Q4W4Y0 310 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CRTC3Q6UUV7 619 aa13.54□□□□□ -0.24
VEGFA-201ENST00000230480 CAND1Q86VP6 1230 aaKnown RBP13.54□□□□□ -0.24
VEGFA-201ENST00000230480 TMPRSS12Q86WS5 348 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms