RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ITIH5Q86UX2 942 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 KBTBD6Q86V97 674 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 FAM186BQ8IYM0 893 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 FAM109AQ8N4B1 249 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 LRRC52Q8N7C0 313 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 OR5B17Q8NGF7 314 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 BICD1Q96G01 975 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 ZFYVE19Q96K21 471 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 LRGUKQ96M69 825 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 PGLYRP2Q96PD5 576 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 CGRRF1Q99675 332 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 TSG101Q99816 390 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 TTYH3Q9C0H2 523 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 NAT10Q9H0A0 1025 aaKnown RBP5□□□□□ -1.61
KARSP3-201ENST00000571212 TMEM8AQ9HCN3 771 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 PDE11AQ9HCR9 933 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 VPS45Q9NRW7 570 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 RXFP3Q9NSD7 469 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 SERTAD4Q9NUC0 356 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 GDAP2Q9NXN4 497 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 TUBGCP4Q9UGJ1 667 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 UBQLN1Q9UMX0 589 aaKnown RBP5□□□□□ -1.61
KARSP3-201ENST00000571212 SLC8A2Q9UPR5 921 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5□□□□□ -1.61
KARSP3-201ENST00000571212 GON4LQ3T8J9 2241 aa5□□□□□ -1.61
KARSP3-201ENST00000571212 ANAPC1Q9H1A4 1944 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 MYO18AQ92614 2054 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GOLGA8IPA6NC78 632 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GOLGA8JA6NMD2 632 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SMTNL1A8MU46 457 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TARM1B6A8C7 271 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TRDMT1O14717 391 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 PRAMEF12O95522 483 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ASS1P00966 412 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 EPB41P11171 864 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 PAX7P23759 505 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 HOXC13P31276 330 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ATICP31939 592 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TUFMP49411 452 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 CYP2J2P51589 502 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 STX17P56962 302 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 LILRA4P59901 499 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 IRX1P78414 480 aaPredicted RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SMARCB1Q12824 385 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GRSF1Q12849 480 aaKnown RBP eCLIP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 RUNX3Q13761 415 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 VEPH1Q14D04 833 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 CCDC6Q16204 474 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ZSCAN26Q16670 478 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 PLK5Q496M5 336 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 C9orf57Q5W0N0 161 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 KRT39Q6A163 491 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 KLHL10Q6JEL2 608 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SARM1Q6SZW1 724 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 USP45Q70EL2 814 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TRAPPC11Q7Z392 1133 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 FMNL3Q8IVF7 1028 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ATAD1Q8NBU5 361 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SEMA6DQ8NFY4 1073 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TTC8Q8TAM2 541 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SPATA18Q8TC71 538 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 TAF4BQ92750 862 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 EXOC4Q96A65 974 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 EEF2KMTQ96G04 330 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GCNAQ96QF7 691 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 C1QTNF7Q9BXJ2 289 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GKN1Q9NS71 199 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 SH3BP4Q9P0V3 963 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ARMCX3Q9UH62 379 aaPredicted RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 ITGA11Q9UKX5 1188 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 CNTN6Q9UQ52 1028 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 PTPRDP23468 1912 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 IGF2RP11717 2491 aa4.99□□□□□ -1.61
KARSP3-201ENST00000571212 FASNP49327 2511 aaKnown RBP4.99□□□□□ -1.61
KARSP3-201ENST00000571212 GOLGA6CA6NDK9 693 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 GOLGA6BA6NDN3 693 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 LINC01548A6NM66 108 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 KCNJ18B7U540 433 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 DCLK1O15075 740 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 AP1G1O43747 822 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 STX10O60499 249 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 TACC1O75410 805 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 RHOBTB1O94844 696 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 FTH1P19P0C7X4 201 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 GOLGA6DP0CG33 693 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 ODC1P11926 461 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 ATP1A3P13637 1013 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 TYRP14679 529 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 HDCP19113 662 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 DRD1P21728 446 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 LIPAP38571 399 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 MATR3P43243 847 aaKnown RBP eCLIP4.98□□□□□ -1.61
KARSP3-201ENST00000571212 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
KARSP3-201ENST00000571212 FMO5P49326 533 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 HNRNPH2P55795 449 aaKnown RBP4.98□□□□□ -1.61
KARSP3-201ENST00000571212 RBP5P82980 135 aa4.98□□□□□ -1.61
KARSP3-201ENST00000571212 SPAG1Q07617 926 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms