RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SELPP16109 830 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 UBA1P22314 1058 aaKnown RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 VBP1P61758 197 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF33BQ06732 778 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF267Q14586 743 aaPredicted RBP10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 CTF1Q16619 201 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 LAYNQ6UX15 382 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 MON1BQ7L1V2 547 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 MUS81Q96NY9 551 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC25A23Q9BV35 468 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF556Q9HAH1 456 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 PDGFCQ9NRA1 345 aa10.83□□□□□ -0.68
CLSTN3-207ENST00000537408 FAM159BA6NKW6 160 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SULT1B1O43704 296 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PSMB9P28065 219 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SNX16P57768 344 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 S100A12P80511 92 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GHRHRQ02643 423 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 TAP1Q03518 808 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 TNK2Q07912 1038 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GRIK4Q16099 956 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 IMPG1Q17R60 797 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 REP15Q6BDI9 236 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 HID1Q8IV36 788 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 TTC16Q8NEE8 873 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PPTC7Q8NI37 304 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 COPS5Q92905 334 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 ZNF224Q9NZL3 707 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SFMBT1Q9UHJ3 866 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SLCO3A1Q9UIG8 710 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 FBXO5Q9UKT4 447 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PABPN1LA6NDY0 278 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SNAP29O95721 258 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 CRHBPP24387 322 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GTF2E2P29084 291 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SNTA1Q13424 505 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PDK2Q15119 407 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 ZIK1Q3SY52 487 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GDPD3Q7L5L3 318 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 TBC1D21Q8IYX1 336 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC22A8Q8TCC7 542 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 MAPK15Q8TD08 544 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 BCL7CQ8WUZ0 217 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 DEDD2Q8WXF8 326 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 POPDC2Q9HBU9 364 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 AGO4Q9HCK5 861 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 ANKEF1Q9NU02 776 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 MKLN1Q9UL63 735 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 EMCNQ9ULC0 261 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 COL4A5P29400 1685 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 RGS5O15539 181 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 B4GAT1O43505 415 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 S100A6P06703 90 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SLC7A2P52569 658 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GRTP1Q5TC63 336 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 LLGL2Q6P1M3 1020 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 EFL1Q7Z2Z2 1120 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 EPHX4Q8IUS5 362 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 CARNMT1Q8N4J0 409 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 DHX38Q92620 1227 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 ACO2Q99798 780 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 MIR1-1HGQ9H1L0 117 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PPA2Q9H2U2 334 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 GMEB2Q9UKD1 530 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 PIN4Q9Y237 131 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 KLHL20Q9Y2M5 609 aa10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 COPG1Q9Y678 874 aaKnown RBP10.82□□□□□ -0.68
CLSTN3-207ENST00000537408 A0A1W2PQ45 241 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 A0A1W2PQY0 241 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TCAF2A6NFQ2 919 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CCDC154A6NI56 674 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 CTDSP2O14595 271 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PMM2O15305 246 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SCO1O75880 301 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SMPD1P17405 629 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 MPSTP25325 297 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 FASTKQ14296 549 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 GALEQ14376 348 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 EMC2Q15006 297 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ACOX1Q15067 660 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SPATC1Q76KD6 591 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 NCLNQ969V3 563 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ST6GAL2Q96JF0 529 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 FTHL17Q9BXU8 183 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 ITM2CQ9NQX7 267 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TRMT13Q9NUP7 481 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 POLR3BQ9NW08 1133 aaPredicted RBP10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PCDHA11Q9Y5I1 949 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 PTGES3LE9PB15 166 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 TOR1AO14656 332 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 YKT6O15498 198 aa10.81□□□□□ -0.68
CLSTN3-207ENST00000537408 SOAT2O75908 522 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms