RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 ICA1LQ8NDH6 482 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PPP1R13LQ8WUF5 828 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 DNASE1L2Q92874 299 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 SPDL1Q96EA4 605 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 RRNAD1Q96FB5 475 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 MAGED4Q96JG8 741 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 TSNARE1Q96NA8 513 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 AIFM2Q9BRQ8 373 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR88Q9GZN0 384 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 EGLN1Q9GZT9 426 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 EPB41L4BQ9H329 900 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 CENPHQ9H3R5 247 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 ERAP1Q9NZ08 941 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 DSEQ9UL01 958 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 STAP1Q9ULZ2 295 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PCDHA7Q9UN72 937 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 ABCC1P33527 1531 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 C12orf71A8MTZ7 269 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 CHADO15335 359 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 CELF2O95319 508 aaKnown RBP7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 APOA1P02647 267 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 GNAT1P11488 350 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 CDC25BP30305 580 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 NTF4P34130 210 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 RYKP34925 604 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 SLC6A11P48066 632 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 GSDMDP57764 484 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 GPR176Q14439 515 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PDK4Q16654 411 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PAGE2BQ5JRK9 111 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 C6orf163Q5TEZ5 329 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 ARHGAP40Q5TG30 622 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PRAMEF13Q5VWM6 474 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 FAM91A1Q658Y4 838 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 BRAT1Q6PJG6 821 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 MAP7D3Q8IWC1 876 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 COMMD1Q8N668 190 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 FNDC5Q8NAU1 212 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 C16orf58Q96GQ5 468 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 CHAMP1Q96JM3 812 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 LRFN5Q96NI6 719 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PCYT2Q99447 389 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 SPATA16Q9BXB7 569 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 SPG21Q9NZD8 308 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 KCNN3Q9UGI6 736 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 SHOC2Q9UQ13 582 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 RCE1Q9Y256 329 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 MFHAS1Q9Y4C4 1052 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 UBE4BO95155 1302 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 INSRP06213 1382 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 PLCH2O75038 1416 aa7.47□□□□□ -1.21
PDGFRA-206ENST00000508170 A0A0U1RQS6 177 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 EFCAB8A8MWE9 144 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 FOXP2O15409 715 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 NCF2P19878 526 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 CASRP41180 1078 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 RANBP1P43487 201 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PER3P56645 1201 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 YWHAEP62258 255 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 SKP1P63208 163 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 GALK2Q01415 458 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 POU4F1Q01851 419 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC6A3Q01959 620 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ZP2Q05996 745 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 MZT1Q08AG7 82 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 TMEM62Q0P6H9 643 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 LDLRAP1Q5SW96 308 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC9A4Q6AI14 798 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 CYP4V2Q6ZWL3 525 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ZNF771Q7L3S4 317 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 DAGLBQ8NCG7 672 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 OR10T2Q8NGX3 314 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 XAGE3Q8WTP9 111 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 TRIB2Q92519 343 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 BPIFA3Q9BQP9 254 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 MECRQ9BV79 373 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ATP13A3Q9H7F0 1226 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 KLHL8Q9P2G9 620 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 RCOR3Q9P2K3 495 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 CRNNQ9UBG3 495 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 CDH22Q9UJ99 828 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ZMYM4Q5VZL5 1548 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 A0A0U1RQJ8 604 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 GPR171O14626 319 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 POLR1CO15160 346 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 USP12O75317 370 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 IDO1P14902 403 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PRKACAP17612 351 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 DDCP20711 480 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ACHEP22303 614 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 PNLIPRP2P54317 469 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 TTMPQ5BVD1 217 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 LRRC38Q5VT99 294 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 ZDHHC20Q5W0Z9 365 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 NME9Q86XW9 330 aa7.46□□□□□ -1.22
PDGFRA-206ENST00000508170 TTLQ8NG68 377 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms