RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ALPLP05186 524 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 GEN1Q17RS7 908 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 IL31Q6EBC2 164 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 NANOGNBQ7Z5D8 188 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 DSG4Q86SJ6 1040 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 PTCD2Q8WV60 388 aaKnown RBP19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 TRIB2Q92519 343 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 TPK1Q9H3S4 243 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 USP22Q9UPT9 525 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 SNX10Q9Y5X0 201 aa19.24■□□□□ 0.67
SNAPC3-206ENST00000490969 H3BMM5 538 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 MSI1O43347 362 aaKnown RBP19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 TCF3P15923 654 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 HRH2P25021 359 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PIGFQ07326 219 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 SREBF2Q12772 1141 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 MAPRE1Q15691 268 aaKnown RBP19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 IMPG1Q17R60 797 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 DPY19L1Q2PZI1 675 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 C6orf183Q5T699 404 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PLEKHG7Q6ZR37 379 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 KIAA0408Q6ZU52 694 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 CLEC4FQ8N1N0 589 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 VPS33AQ96AX1 596 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 TSPAN17Q96FV3 270 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PLEKHA5Q9HAU0 1116 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 A0A1W2PP18 115 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 UBXN8O00124 270 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 UPK1AO00322 258 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PPP6CO00743 305 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 LSM1O15116 133 aaKnown RBP19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 HGFP14210 728 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 LBPP18428 481 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 CLCN5P51795 746 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 FOXA1P55317 472 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 HERVK_113P63132 956 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 SELENBP1Q13228 472 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 LINC00299Q6ZSB3 139 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 RIMKLAQ8IXN7 391 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 NAT16Q8N8M0 369 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 TMBIM1Q969X1 311 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 TUBGCP3Q96CW5 907 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 TMEM74Q96NL1 305 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 ERVK-6Q9BXR3 956 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 FBXW11Q9UKB1 542 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 POU2F3Q9UKI9 436 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PDE10AQ9Y233 779 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 PCDHGA8Q9Y5G5 932 aa19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 MAGED1Q9Y5V3 778 aaPredicted RBP19.23■□□□□ 0.67
SNAPC3-206ENST00000490969 KPNA6O60684 536 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 BEST1O76090 585 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CDK14O94921 469 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 FYNP06241 537 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 RCVRNP35243 200 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 FLT3LGP49771 235 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 EEFSECP57772 596 aaKnown RBP19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 SLC14A2Q15849 920 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CRY1Q16526 586 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 C6orf141Q5SZD1 244 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 C9orf57Q5W0N0 161 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 MFSD4AQ8N468 514 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 BEST2Q8NFU1 509 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 NSMCE3Q96MG7 304 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 MID1IP1Q9NPA3 183 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 RNF19AQ9NV58 838 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 DERAQ9Y315 318 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 COL1A2P08123 1366 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 ASPDHA6ND91 283 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 AZIN1O14977 448 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 TREHO43280 583 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 GMNNO75496 209 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 ANXA9O76027 345 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 FGF4P08620 206 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 HNRNPFP52597 415 aaKnown RBP19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 TPTEP56180 551 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 GABARAPL2P60520 117 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 MFSD10Q14728 455 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 INAQ16352 499 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 HECTD2Q5U5R9 776 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CATSPER4Q7RTX7 472 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CYP2U1Q7Z449 544 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 STK32CQ86UX6 486 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CCDC117Q8IWD4 279 aaPredicted RBP19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 KIAA2013Q8IYS2 634 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CHDHQ8NE62 594 aaPredicted RBP19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 TSGA13Q96PP4 275 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 CYP2S1Q96SQ9 504 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 DUSP16Q9BY84 665 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 TOR3AQ9H497 397 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 EHD1Q9H4M9 534 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 SIAEQ9HAT2 523 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 PCDH12Q9NPG4 1184 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 SCUBE2Q9NQ36 999 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 SNTG2Q9NY99 539 aa19.22■□□□□ 0.67
SNAPC3-206ENST00000490969 DEAF1O75398 565 aaPredicted RBP19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 CHRNA4P43681 627 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 ZBTB6Q15916 424 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 MEP1AQ16819 746 aa19.21■□□□□ 0.67
SNAPC3-206ENST00000490969 PAGE3Q5JUK9 113 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms