RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SMARCD1Q96GM5 515 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SLC2A13Q96QE2 648 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SMIM14Q96QK8 99 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 TBL1YQ9BQ87 522 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 MTG1Q9BT17 334 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 BEGAINQ9BUH8 593 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 ALG9Q9H6U8 611 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 WDR41Q9HAD4 459 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 EIF2B3Q9NR50 452 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 PCDH10Q9P2E7 1040 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 CDYLQ9Y232 598 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 PRG3Q9Y2Y8 225 aaPredicted RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 SPEF1Q9Y4P9 236 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 SNX13Q9Y5W8 968 aa5.01□□□□□ -1.61
SSR1-202ENST00000397511 COPG1Q9Y678 874 aaKnown RBP5.01□□□□□ -1.61
SSR1-202ENST00000397511 PLXNB2O15031 1838 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RGSL1A5PLK6 1076 aa5□□□□□ -1.61
SSR1-202ENST00000397511 TRIM64A6NGJ6 449 aa5□□□□□ -1.61
SSR1-202ENST00000397511 EVPLLA8MZ36 301 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GABRDO14764 452 aa5□□□□□ -1.61
SSR1-202ENST00000397511 DYRK3O43781 588 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CNTN5O94779 1100 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SEC24DO94855 1032 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 SIX3O95343 332 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 MPOP05164 745 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KCNE1P15382 129 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CES1P23141 567 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CASP2P42575 452 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CRYBB1P53674 252 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 RAB10P61026 200 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SLC10A7Q0GE19 358 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SEMA3BQ13214 749 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SLC12A1Q13621 1099 aa5□□□□□ -1.61
SSR1-202ENST00000397511 HERC3Q15034 1050 aa5□□□□□ -1.61
SSR1-202ENST00000397511 NFE2Q16621 373 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 FSCN1Q16658 493 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 INSCQ1MX18 579 aa5□□□□□ -1.61
SSR1-202ENST00000397511 LRIT3Q3SXY7 679 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CDONQ4KMG0 1287 aa5□□□□□ -1.61
SSR1-202ENST00000397511 NHSL2Q5HYW2 709 aa5□□□□□ -1.61
SSR1-202ENST00000397511 TJAP1Q5JTD0 557 aa5□□□□□ -1.61
SSR1-202ENST00000397511 LDLRAP1Q5SW96 308 aa5□□□□□ -1.61
SSR1-202ENST00000397511 TSTD2Q5T7W7 516 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GPR158Q5T848 1215 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GDF6Q6KF10 455 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 TUBA3EQ6PEY2 450 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ELMOD2Q8IZ81 293 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PGAM4Q8N0Y7 254 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ANKRD49Q8WVL7 239 aa5□□□□□ -1.61
SSR1-202ENST00000397511 LRTOMTQ8WZ04 291 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ESAMQ96AP7 390 aa5□□□□□ -1.61
SSR1-202ENST00000397511 HDAC11Q96DB2 347 aa5□□□□□ -1.61
SSR1-202ENST00000397511 LRCH3Q96II8 777 aa5□□□□□ -1.61
SSR1-202ENST00000397511 EXOC2Q96KP1 924 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SLC29A1Q99808 456 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CIB1Q99828 191 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GPN2Q9H9Y4 310 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 C12orf10Q9HB07 376 aa5□□□□□ -1.61
SSR1-202ENST00000397511 NMUR1Q9HB89 426 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CPNE5Q9HCH3 593 aa5□□□□□ -1.61
SSR1-202ENST00000397511 MAGEE1Q9HCI5 957 aa5□□□□□ -1.61
SSR1-202ENST00000397511 MRPL40Q9NQ50 206 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 STMN3Q9NZ72 180 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RCOR3Q9P2K3 495 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 DSEQ9UL01 958 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RAP2CQ9Y3L5 183 aa5□□□□□ -1.61
SSR1-202ENST00000397511 GPSM3Q9Y4H4 160 aa5□□□□□ -1.61
SSR1-202ENST00000397511 V9GYQ6 96 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PRRC2BQ5JSZ5 2229 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 MBLAC1A4D2B0 266 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 HHLA1C9JL84 531 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SNPHO15079 494 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ACOX3O15254 700 aa5□□□□□ -1.61
SSR1-202ENST00000397511 MAFKO60675 156 aa5□□□□□ -1.61
SSR1-202ENST00000397511 HAPLN1P10915 354 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 CDH1P12830 882 aa5□□□□□ -1.61
SSR1-202ENST00000397511 ITIH1P19827 911 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CCR1P32246 355 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PBX3P40426 434 aa5□□□□□ -1.61
SSR1-202ENST00000397511 KCNC1P48547 511 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RPL34P49207 117 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 YBX1P67809 324 aaKnown RBP5□□□□□ -1.61
SSR1-202ENST00000397511 CTAG1AP78358 180 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PPP2R2BQ00005 443 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PLIN5Q00G26 463 aa5□□□□□ -1.61
SSR1-202ENST00000397511 DSC2Q02487 901 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PRKCQQ04759 706 aa5□□□□□ -1.61
SSR1-202ENST00000397511 FCHO2Q0JRZ9 810 aa5□□□□□ -1.61
SSR1-202ENST00000397511 BFSP2Q13515 415 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PTPRRQ15256 657 aa5□□□□□ -1.61
SSR1-202ENST00000397511 PSMD5Q16401 504 aa5□□□□□ -1.61
SSR1-202ENST00000397511 CRY1Q16526 586 aa5□□□□□ -1.61
SSR1-202ENST00000397511 FAM83EQ2M2I3 478 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SMU1Q2TAY7 513 aa5□□□□□ -1.61
SSR1-202ENST00000397511 SLC39A12Q504Y0 691 aa5□□□□□ -1.61
SSR1-202ENST00000397511 AGKQ53H12 422 aa5□□□□□ -1.61
SSR1-202ENST00000397511 MTX3Q5HYI7 312 aa5□□□□□ -1.61
SSR1-202ENST00000397511 LDLRAD1Q5T700 205 aa5□□□□□ -1.61
SSR1-202ENST00000397511 RSBN1Q5VWQ0 802 aaPredicted RBP5□□□□□ -1.61
SSR1-202ENST00000397511 PKN3Q6P5Z2 889 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms