RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 TYROBPO43914 113 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 BANF1O75531 89 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 INMTO95050 263 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 C9P02748 559 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 ALDH2P05091 517 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CD6P30203 668 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DDOSTP39656 456 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 PPM1FP49593 454 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 COL9A3Q14050 684 aaPredicted RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 FAM214AQ32MH5 1076 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 DDI2Q5TDH0 399 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 LACC1Q8IV20 430 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 THNSL1Q8IYQ7 743 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 GAL3ST3Q96A11 431 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 ADPGKQ9BRR6 497 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 NMRAL1Q9HBL8 299 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 INTS7Q9NVH2 962 aaKnown RBP10.38□□□□□ -0.75
PRDM1-201ENST00000369089 FEM1BQ9UK73 627 aa10.38□□□□□ -0.75
PRDM1-201ENST00000369089 CLIC3O95833 236 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GK3PQ14409 553 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MED22Q15528 200 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GK5Q6ZS86 529 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 AHSA2Q719I0 299 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 SLC34A3Q8N130 599 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 SETD6Q8TBK2 473 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GANCQ8TET4 914 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KAT2AQ92830 837 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LGALS12Q96DT0 336 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF578Q96N58 590 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 RAVER2Q9HCJ3 691 aaKnown RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 IL37Q9NZH6 218 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 NWD1Q149M9 1564 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 A0A0B4J269 797 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 BBIP1A8MTZ0 92 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 H7C0S8 307 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CYB561D2O14569 222 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 TPP1O14773 563 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 OIP5O43482 229 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MBP02144 154 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 NFICP08651 508 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ANXA3P12429 323 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MLLT3P42568 568 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GLRBP48167 497 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 DAG1Q14118 895 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CDO1Q16878 200 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LINC00299Q6ZSB3 139 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 GATAD2BQ8WXI9 593 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF669Q96BR6 464 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MCEEQ96PE7 176 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 SLC9A7Q96T83 725 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 DPEP3Q9H4B8 488 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 VRTNQ9H8Y1 702 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 TM9SF3Q9HD45 589 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KLHL1Q9NR64 748 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 UBQLN1Q9UMX0 589 aaKnown RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 PCDHGB6Q9Y5F9 930 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 A0A096LPK6 155 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 UBA6A0AVT1 1052 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 H0YAE9 185 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 TXNL1O43396 289 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 MT-CO1P00395 513 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CTNNB1P35222 781 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CCNA1P78396 465 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 HTRA4P83105 476 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 C19orf57Q0VDD7 668 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 DUSP7Q16829 419 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 SPDYE7PQ495Y7 208 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 NOMO2Q5JPE7 1267 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CHERPQ8IWX8 916 aaKnown RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KATNAL2Q8IYT4 538 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 COQ8AQ8NI60 647 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 NR4A3Q92570 626 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 TSPAN17Q96FV3 270 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF597Q96LX8 424 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CPXM1Q96SM3 734 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LHPPQ9H008 270 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CRISPLD1Q9H336 500 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 CNTNAP5Q8WYK1 1306 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KDM4FA0A1W2PPD8 638 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 LRRC72A6NJI9 287 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KCNU1A8MYU2 1149 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 KHDRBS3O75525 346 aaKnown RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 SUPT7LO94864 414 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ZNF682O95780 498 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 FTH1P02794 183 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ACADLP28330 430 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 DUSP6Q16828 381 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 FAM209BQ5JX69 171 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
PRDM1-201ENST00000369089 IPCEF1Q8WWN9 437 aaPredicted RBP10.37□□□□□ -0.75
PRDM1-201ENST00000369089 ITPAQ9BY32 194 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms