RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MAN2B2Q9Y2E5 1009 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 MADDQ8WXG6 1647 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 TPD52L2O43399 206 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 WNT3AP56704 352 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 DLG1Q12959 904 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 KLF10Q13118 480 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SIM2Q14190 667 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 HECTD2Q5U5R9 776 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 TCEAL6Q6IPX3 200 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 FRRS1Q6ZNA5 592 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 TNFAIP8L1Q8WVP5 186 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 AKT1S1Q96B36 256 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 KCTD5Q9NXV2 234 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SLC27A5Q9Y2P5 690 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 FSCN2O14926 492 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SCN1BQ07699 218 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 OR8H1Q8NGG4 311 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 TSSK3Q96PN8 268 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 IFT46Q9NQC8 304 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 KIAA1522Q9P206 1035 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CDH22Q9UJ99 828 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 PCDHB1Q9Y5F3 818 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 MAFO75444 373 aaPredicted RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 PIAS1O75925 651 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 CXCL9Q07325 125 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 BRMS1LQ5PSV4 323 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 C6orf52Q5T4I8 152 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 TMPRSS11BQ86T26 416 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 BEND7Q8N7W2 519 aaPredicted RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 TRMUO75648 421 aaKnown RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 TNFSF9P41273 254 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 RALGPS2Q86X27 583 aaPredicted RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 PHYKPLQ8IUZ5 450 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 APOLD1Q96LR9 279 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 CIB1Q99828 191 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 ACAT2Q9BWD1 397 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 CNOT6Q9ULM6 557 aaKnown RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 DCLK1O15075 740 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 C22orf31O95567 290 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 SERPINA3P01011 423 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 DBIP07108 87 aaKnown RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 KIR3DL1P43629 444 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 TAS2R40P59535 323 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 DCST1Q5T197 706 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 FRMD7Q6ZUT3 714 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 SH3RF1Q7Z6J0 888 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 SLC43A3Q8NBI5 491 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 GMIPQ9P107 970 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 GSC2O15499 205 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 GMFGO60234 142 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 SIN3BO75182 1162 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 REP15Q6BDI9 236 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 CADM2Q8N3J6 435 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF615Q8N8J6 731 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 DUSP16Q9BY84 665 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 CCDC177Q9NQR7 707 aaPredicted RBP14.8□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF446Q9NWS9 450 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 PCDHB9Q9Y5E1 797 aa14.8□□□□□ -0.04
LMX1B-201ENST00000355497 ELOVL7A1L3X0 281 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 SULT2A1Q06520 285 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 GJD3Q8N144 294 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 TWIST2Q8WVJ9 160 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 CDT1Q9H211 546 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 KCNMB3Q9NPA1 279 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 SMPD3Q9NY59 655 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-201ENST00000355497 IPO13O94829 963 aaKnown RBP14.79□□□□□ -0.04
LMX1B-201ENST00000355497 DNTTP04053 509 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 RB1P06400 928 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 KELP23276 732 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 MAGEA2P43356 314 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 PPP3R1P63098 170 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF662Q6ZS27 426 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 GPALPP1Q8IXQ4 340 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 PPP1R13LQ8WUF5 828 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 WDR55Q9H6Y2 383 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-201ENST00000355497 PLEKHA1Q9HB21 404 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 PLLPQ9Y342 182 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 TELO2Q9Y4R8 837 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 GLYATL1P3A0A0U1RQE8 302 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 LRRC10BA6NIK2 292 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 H3BNX3 289 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 ATG13O75143 517 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 PSMD10O75832 226 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 MATN4O95460 622 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 ADH1CP00326 375 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 COL6A2P12110 1019 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 CTNNB1P35222 781 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 MSX2P35548 267 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-201ENST00000355497 SMAD3P84022 425 aaKnown RBP14.79□□□□□ -0.04
LMX1B-201ENST00000355497 CERCAMQ5T4B2 595 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 DCLRE1AQ6PJP8 1040 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 MGME1Q9BQP7 344 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 SYNPO2Q9UMS6 1093 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 MAP4K5Q9Y4K4 846 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 HES2Q9Y543 173 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 SQORQ9Y6N5 450 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 CAPN8A6NHC0 703 aa14.79□□□□□ -0.04
LMX1B-201ENST00000355497 GRM6O15303 877 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms