RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Znf518bB2RRE4 1077 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr287E9PZS7 322 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r91E9Q2U5 856 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Il6raP22272 460 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Serpind1P49182 478 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hcrtr1P58307 416 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam109bQ14B98 259 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Znf667Q2TL60 609 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tex24Q5DP50 351 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mapre3Q6PER3 281 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp759Q7M6X3 721 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Clec18aQ7TSQ1 534 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 March4Q80TE3 409 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Snx32Q80ZJ7 404 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Q810S2 196 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Mettl2Q8BMK1 389 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nedd4lQ8CFI0 1004 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trpv3Q8K424 791 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 IlkapQ8R0F6 392 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tctn3Q8R2Q6 595 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rfc3Q8R323 356 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gipc3Q8R5M0 297 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sp7Q8VI67 428 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ddx1Q91VR5 740 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pcdhga6Q91XY2 932 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Dhrs7bQ99J47 323 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tpra1Q99MU1 369 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tdrd1Q99MV1 1172 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Snrpb2Q9CQI7 225 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Sppl3Q9CUS9 384 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tssk3Q9D2E1 268 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trappc4Q9ES56 219 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hacl1Q9QXE0 581 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Dnajb9Q9QYI6 222 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Acot2Q9QYR9 453 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Adgra2Q91ZV8 1336 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rhbdl2A2AGA4 302 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr543E9PWI5 336 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r90E9PXJ8 863 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 SmgcF6VRN1 385 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hk2O08528 917 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rgs5O08850 181 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Foxd2O35392 492 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Scd1P13516 355 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 CtshP49935 333 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pla2g5P97391 137 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fam35aQ3UEN2 891 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ermp1Q3UVK0 898 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Kcna6Q61923 529 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pan3Q640Q5 837 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ckmt2Q6P8J7 419 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pomt2Q8BGQ4 820 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Luzp2Q8BGY3 345 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 OsgepQ8BWU5 335 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lca5lQ8C0X0 741 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp566Q8VCI1 386 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Pla2g15Q8VEB4 412 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hspbp1Q99P31 357 aaKnown RBP9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrrc4Q99PH1 652 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Efcab1Q9D3N2 212 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Kdelc1Q9JHP7 502 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Phc2Q9QWH1 850 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tyk2Q9R117 1184 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trim3Q9R1R2 744 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 DnpepQ9Z2W0 473 aa9.69□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TroapB7ZNG4 668 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn2r95L7N274 845 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Scamp3O35609 349 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 RrasP10833 218 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 GhrP16882 650 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tulp2P46686 562 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Lrpap1P55302 360 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ppp4cP97470 307 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Cyb5r4Q3TDX8 528 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Znf746Q3U133 652 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Trafd1Q3UDK1 580 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Cyp2c66Q5GLZ0 490 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Heatr9Q5QNV8 569 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Carns1Q6ZPS2 827 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hs6st2Q80UW0 612 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Noc4lQ8BHY2 516 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Q8C3W1 322 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Leg1Q8C6C9 337 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Vmn1r205Q8R276 316 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr77Q8VEY9 312 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Olfr837Q8VFJ4 312 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nr3c2Q8VII8 978 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Maged2Q9ER67 616 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Map3k20Q9ESL4 802 aaKnown RBP9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 TinagQ9WUR0 475 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Tcf7l1Q9Z1J1 584 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Ms4a14A0A087WSD2 1232 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Chil5A0A0G2JDS2 431 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 EloblA6PWE0 161 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Rpl3lE9PWZ3 407 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Gcnt4E9Q649 455 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Zfp619G3X9T2 1161 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Hps1O08983 704 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Nptx2O70340 429 aa9.68□□□□□ -0.86
Hmgb1-201ENSMUST00000085546 Fkbp1aP26883 108 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms