Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm25239-201ENSMUST00000174915 86 ntBASIC38.7■■■■□ 3.79
Pcdhga6Q91XY2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Pcdhga6Q91XY2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Pcdhga6Q91XY2 Gm24109-201ENSMUST00000175489 103 ntBASIC33.82■■■■□ 3
Pcdhga6Q91XY2 Gm15042-201ENSMUST00000120212 883 ntBASIC33.32■■■□□ 2.92
Pcdhga6Q91XY2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Pcdhga6Q91XY2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Pcdhga6Q91XY2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Pcdhga6Q91XY2 Gm15045-201ENSMUST00000117359 883 ntBASIC32.41■■■□□ 2.78
Pcdhga6Q91XY2 Gm23366-201ENSMUST00000175022 89 ntBASIC32.33■■■□□ 2.77
Pcdhga6Q91XY2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pcdhga6Q91XY2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.7■■■□□ 2.67
Pcdhga6Q91XY2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
Pcdhga6Q91XY2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdhga6Q91XY2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcdhga6Q91XY2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.3■■■□□ 2.6
Pcdhga6Q91XY2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Pcdhga6Q91XY2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
Pcdhga6Q91XY2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.87■■■□□ 2.53
Pcdhga6Q91XY2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pcdhga6Q91XY2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pcdhga6Q91XY2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcdhga6Q91XY2 Gm25238-201ENSMUST00000174914 89 ntBASIC30.67■■■□□ 2.5
Pcdhga6Q91XY2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Pcdhga6Q91XY2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
Pcdhga6Q91XY2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Pcdhga6Q91XY2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
Pcdhga6Q91XY2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pcdhga6Q91XY2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Pcdhga6Q91XY2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.79■■■□□ 2.36
Pcdhga6Q91XY2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.76■■■□□ 2.35
Pcdhga6Q91XY2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pcdhga6Q91XY2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.64■■■□□ 2.34
Pcdhga6Q91XY2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdhga6Q91XY2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Pcdhga6Q91XY2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.42■■■□□ 2.3
Pcdhga6Q91XY2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdhga6Q91XY2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.4■■■□□ 2.3
Pcdhga6Q91XY2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.38■■■□□ 2.29
Pcdhga6Q91XY2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pcdhga6Q91XY2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.3■■■□□ 2.28
Pcdhga6Q91XY2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.3■■■□□ 2.28
Pcdhga6Q91XY2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pcdhga6Q91XY2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.28■■■□□ 2.28
Pcdhga6Q91XY2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhga6Q91XY2 Gm27325-201ENSMUST00000175467 74 ntBASIC29.08■■■□□ 2.25
Pcdhga6Q91XY2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhga6Q91XY2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pcdhga6Q91XY2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
Pcdhga6Q91XY2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhga6Q91XY2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.01■■■□□ 2.23
Pcdhga6Q91XY2 Gm8109-201ENSMUST00000194076 746 ntBASIC28.96■■■□□ 2.23
Pcdhga6Q91XY2 Rab21-202ENSMUST00000218831 843 ntBASIC28.96■■■□□ 2.23
Pcdhga6Q91XY2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.96■■■□□ 2.23
Pcdhga6Q91XY2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhga6Q91XY2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhga6Q91XY2 Psd-208ENSMUST00000224556 2034 ntBASIC28.79■■■□□ 2.2
Pcdhga6Q91XY2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Pcdhga6Q91XY2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Pcdhga6Q91XY2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhga6Q91XY2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pcdhga6Q91XY2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhga6Q91XY2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.48■■■□□ 2.15
Pcdhga6Q91XY2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Pcdhga6Q91XY2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.42■■■□□ 2.14
Pcdhga6Q91XY2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhga6Q91XY2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.29■■■□□ 2.12
Pcdhga6Q91XY2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.28■■■□□ 2.12
Pcdhga6Q91XY2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhga6Q91XY2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhga6Q91XY2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.25■■■□□ 2.11
Pcdhga6Q91XY2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pcdhga6Q91XY2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pcdhga6Q91XY2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdhga6Q91XY2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhga6Q91XY2 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.02■■■□□ 2.08
Pcdhga6Q91XY2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28■■■□□ 2.07
Pcdhga6Q91XY2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhga6Q91XY2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhga6Q91XY2 Gm24804-201ENSMUST00000174982 85 ntBASIC27.97■■■□□ 2.07
Pcdhga6Q91XY2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdhga6Q91XY2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Pcdhga6Q91XY2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Pcdhga6Q91XY2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pcdhga6Q91XY2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.77■■■□□ 2.04
Pcdhga6Q91XY2 Gm27322-201ENSMUST00000184007 104 ntBASIC27.77■■■□□ 2.04
Pcdhga6Q91XY2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.73■■■□□ 2.03
Pcdhga6Q91XY2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pcdhga6Q91XY2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.66■■■□□ 2.02
Pcdhga6Q91XY2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Pcdhga6Q91XY2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhga6Q91XY2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhga6Q91XY2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
Pcdhga6Q91XY2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
Pcdhga6Q91XY2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.58■■■□□ 2.01
Pcdhga6Q91XY2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.58■■■□□ 2.01
Pcdhga6Q91XY2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Pcdhga6Q91XY2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.52■■■□□ 2
Pcdhga6Q91XY2 Zfp131-205ENSMUST00000223812 663 ntBASIC27.5■■□□□ 1.99
Pcdhga6Q91XY2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.5■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms