RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 TLR10Q9BXR5 811 aa20.7■□□□□ 0.9
SF1-221ENST00000633899 ZNHIT2Q9UHR6 403 aa20.7■□□□□ 0.9
SF1-221ENST00000633899 C2orf81A6NN90 581 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 C1QTNF9BB2RNN3 333 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 STX7O15400 261 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 PSMD3O43242 534 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 IFNB1P01574 187 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 FGGP02679 453 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 FUCA1P04066 466 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 C1QTNF9P0C862 333 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 ADRA1AP35348 466 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 SPAM1P38567 509 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 ADCY8P40145 1251 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 CLDN6P56747 220 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 INSM1Q01101 510 aaPredicted RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 SPARCL1Q14515 664 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 OASLQ15646 514 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 SLC30A9Q6PML9 568 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 RANBP10Q6VN20 620 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 TTC30BQ8N4P2 665 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 TAB3Q8N5C8 712 aaPredicted RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 CCDC89Q8N998 374 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 OR6C4Q8NGE1 309 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 GPBAR1Q8TDU6 330 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 PTCD2Q8WV60 388 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 SYNDIG1Q9H7V2 258 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 LRRC40Q9H9A6 602 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 RMI1Q9H9A7 625 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.69■□□□□ 0.94e-11■□□□□ 10.9
SF1-221ENST00000633899 FEZ2Q9UHY8 353 aaPredicted RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 CNOT6Q9ULM6 557 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 CLCA2Q9UQC9 943 aa20.69■□□□□ 0.9
SF1-221ENST00000633899 OAS3Q9Y6K5 1087 aaKnown RBP20.69■□□□□ 0.9
SF1-221ENST00000633899 SPEGQ15772 3267 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 RP1P56715 2156 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 OPA1O60313 960 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 USP12O75317 370 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 PPFIA2O75334 1257 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 AK4P27144 223 aaPredicted RBP20.68■□□□□ 0.9
SF1-221ENST00000633899 CXCR5P32302 372 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ACTR1BP42025 376 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 LMAN1P49257 510 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ACTR1AP61163 376 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 CTBSQ01459 385 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 BIRC2Q13490 618 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 OLIG2Q13516 323 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 LONRF2Q1L5Z9 754 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 PYCR3Q53H96 274 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 GDAP1Q8TB36 358 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ZDHHC1Q8WTX9 485 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 GATA6Q92908 595 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 GLYATL1Q969I3 302 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 SCARF2Q96GP6 870 aaPredicted RBP20.68■□□□□ 0.9
SF1-221ENST00000633899 KCNF1Q9H3M0 494 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ARFGAP3Q9NP61 516 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 IL17CQ9P0M4 197 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 TAAR2Q9P1P5 351 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ZKSCAN5Q9Y2L8 839 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 JRKLQ9Y4A0 524 aa20.68■□□□□ 0.9
SF1-221ENST00000633899 ZNF106Q9H2Y7 1883 aaKnown RBP20.67■□□□□ 0.9
SF1-221ENST00000633899 GLYATL1P3A0A0U1RQE8 302 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 BUD23O43709 281 aaKnown RBP20.67■□□□□ 0.9
SF1-221ENST00000633899 METTL18O95568 372 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 CRTAMO95727 393 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 LPOP22079 712 aaPredicted RBP20.67■□□□□ 0.9
SF1-221ENST00000633899 PDE1BQ01064 536 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 LRP8Q14114 963 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 TAF1AQ15573 450 aaPredicted RBP20.67■□□□□ 0.9
SF1-221ENST00000633899 CCNG2Q16589 344 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 C14orf28Q4W4Y0 310 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 PERM1Q5SV97 790 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 FAM151BQ6UXP7 276 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 MARCH9Q86YJ5 346 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 RTP4Q96DX8 246 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 CCDC3Q9BQI4 270 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 OR2AG1Q9H205 316 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 TRIM39Q9HCM9 518 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 TRMT1Q9NXH9 659 aaKnown RBP20.67■□□□□ 0.9
SF1-221ENST00000633899 ARL5AQ9Y689 179 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 ASXL3Q9C0F0 2248 aa20.67■□□□□ 0.9
SF1-221ENST00000633899 GPR89AB7ZAQ6 455 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 E7EVH7 732 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 KIF5CO60282 957 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 MT-CO3P00414 261 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 GPR89BP0CG08 455 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 TARDBPQ13148 414 aaKnown RBP eCLIP20.66■□□□□ 0.9
SF1-221ENST00000633899 ITGA9Q13797 1035 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 GTF2H3Q13889 308 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 OGFOD3Q6PK18 319 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 CHST15Q7LFX5 561 aaPredicted RBP20.66■□□□□ 0.9
SF1-221ENST00000633899 PDCD7Q8N8D1 485 aaKnown RBP20.66■□□□□ 0.9
SF1-221ENST00000633899 GPR156Q8NFN8 814 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 WDR48Q8TAF3 677 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 BRSK1Q8TDC3 778 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 CCDC74AQ96AQ1 378 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 PDLIM2Q96JY6 352 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 DEPDC7Q96QD5 511 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 VPS35Q96QK1 796 aa20.66■□□□□ 0.9
SF1-221ENST00000633899 SPATS2LQ9NUQ6 558 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms