RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 ARL10Q8N8L6 244 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 ACTRT1Q8TDG2 376 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 NAT6Q93015 286 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 GLYATL1Q969I3 302 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 TMEM168Q9H0V1 697 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 MRPL40Q9NQ50 206 aaKnown RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 TRMT1Q9NXH9 659 aaKnown RBP14.17□□□□□ -0.14
HDDC2-209ENST00000609477 MOSPD1Q9UJG1 213 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 APPL1Q9UKG1 709 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SUFUQ9UMX1 484 aa14.17□□□□□ -0.14
HDDC2-209ENST00000609477 SPTBN2O15020 2390 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 AP3B1O00203 1094 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 VEGFDO43915 354 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 SUN1O94901 812 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 GAS8O95995 478 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 FUCA1P04066 466 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 TCP1P17987 556 aaKnown RBP14.16□□□□□ -0.14
HDDC2-209ENST00000609477 DNAJC3Q13217 504 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 SEMA5AQ13591 1074 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 SNX1Q13596 522 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 PYCR3Q53H96 274 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 CHCHD4Q8N4Q1 142 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
HDDC2-209ENST00000609477 PNPLA1Q8N8W4 532 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 WDR48Q8TAF3 677 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 OR2M4Q96R27 311 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 OSBPL9Q96SU4 736 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 SCNM1Q9BWG6 230 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 IL26Q9NPH9 171 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 KCND1Q9NSA2 647 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 SNX12Q9UMY4 172 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 GPR34Q9UPC5 381 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 MSRB2Q9Y3D2 182 aa14.16□□□□□ -0.14
HDDC2-209ENST00000609477 LY6G6EA0A0G2JKS1 128 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 GLYATL1P3A0A0U1RQE8 302 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 E7EVH7 732 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 PGRMC1O00264 195 aaKnown RBP14.15□□□□□ -0.14
HDDC2-209ENST00000609477 INPP4BO15327 924 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 NUAK1O60285 661 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 DNAJC6O75061 913 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 ASMTLO95671 621 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 SLC4A1P02730 911 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
HDDC2-209ENST00000609477 PNLIPP16233 465 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 ADCY8P40145 1251 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 GNPDA1P46926 289 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 POLD2P49005 469 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 CDH17Q12864 832 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 LDLRAP1Q5SW96 308 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 GSTA5Q7RTV2 222 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 PRELID2Q8N945 189 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 GPR156Q8NFN8 814 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 ZCCHC2Q9C0B9 1178 aaKnown RBP14.15□□□□□ -0.14
HDDC2-209ENST00000609477 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 BPIFA1Q9NP55 256 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 EIF2B3Q9NR50 452 aaKnown RBP14.15□□□□□ -0.14
HDDC2-209ENST00000609477 SMOXQ9NWM0 555 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 PADI4Q9UM07 663 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 U3KQA8 63 aa14.15□□□□□ -0.14
HDDC2-209ENST00000609477 NCOR2Q9Y618 2525 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 GOLGA6L10A0A0M3HER8 536 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 CHUKO15111 745 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 HYAL3O43820 417 aaPredicted RBP14.14□□□□□ -0.15
HDDC2-209ENST00000609477 KCNJ13O60928 360 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 USP12O75317 370 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 LMAN1P49257 510 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 CLCNKAP51800 687 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 CDK16Q00536 496 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 CTBSQ01459 385 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 CYP1B1Q16678 543 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 KCTD16Q68DU8 428 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 SLC35F3Q8IY50 421 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 FAM46DQ8NEK8 389 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 GRAMD1AQ96CP6 724 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 APOL2Q9BQE5 337 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 RAB6BQ9NRW1 208 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 ZNHIT2Q9UHR6 403 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 GPSM3Q9Y4H4 160 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 ZNF106Q9H2Y7 1883 aaKnown RBP14.14□□□□□ -0.15
HDDC2-209ENST00000609477 BPTFQ12830 3046 aa14.14□□□□□ -0.15
HDDC2-209ENST00000609477 PTPRBP23467 1997 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 AGAP14A8MT82 685 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 H7C0S8 307 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 ZW10O43264 779 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 GRID2O43424 1007 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 LDB2O43679 373 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 NUDT21O43809 227 aaKnown RBP14.13□□□□□ -0.15
HDDC2-209ENST00000609477 CELA2BP08218 269 aaPredicted RBP14.13□□□□□ -0.15
HDDC2-209ENST00000609477 GLB1P16278 677 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 PSMA3P25788 255 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 RPL22P35268 128 aaKnown RBP14.13□□□□□ -0.15
HDDC2-209ENST00000609477 GNG11P61952 73 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 SPARCL1Q14515 664 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 ATP13A5Q4VNC0 1218 aa14.13□□□□□ -0.15
HDDC2-209ENST00000609477 ARMC3Q5W041 872 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms