RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ARL10Q8N8L6 244 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 ACTRT1Q8TDG2 376 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 NAT6Q93015 286 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 GLYATL1Q969I3 302 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 TMEM168Q9H0V1 697 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 MRPL40Q9NQ50 206 aaKnown RBP14.17□□□□□ -0.14
HDDC2-206ENST00000608461 TRMT1Q9NXH9 659 aaKnown RBP14.17□□□□□ -0.14
HDDC2-206ENST00000608461 MOSPD1Q9UJG1 213 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 APPL1Q9UKG1 709 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 SUFUQ9UMX1 484 aa14.17□□□□□ -0.14
HDDC2-206ENST00000608461 SPTBN2O15020 2390 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 AP3B1O00203 1094 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 VEGFDO43915 354 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 SUN1O94901 812 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 GAS8O95995 478 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 FUCA1P04066 466 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 TCP1P17987 556 aaKnown RBP14.16□□□□□ -0.14
HDDC2-206ENST00000608461 DNAJC3Q13217 504 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 SEMA5AQ13591 1074 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 SNX1Q13596 522 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 PYCR3Q53H96 274 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 GALNT13Q8IUC8 556 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 CHCHD4Q8N4Q1 142 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 PDCD7Q8N8D1 485 aaKnown RBP14.16□□□□□ -0.14
HDDC2-206ENST00000608461 PNPLA1Q8N8W4 532 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 WDR48Q8TAF3 677 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 OR2M4Q96R27 311 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 OSBPL9Q96SU4 736 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 SCNM1Q9BWG6 230 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 IL26Q9NPH9 171 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 KCND1Q9NSA2 647 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 SNX12Q9UMY4 172 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 GPR34Q9UPC5 381 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 MSRB2Q9Y3D2 182 aa14.16□□□□□ -0.14
HDDC2-206ENST00000608461 LY6G6EA0A0G2JKS1 128 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 GLYATL1P3A0A0U1RQE8 302 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 E7EVH7 732 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 PGRMC1O00264 195 aaKnown RBP14.15□□□□□ -0.14
HDDC2-206ENST00000608461 INPP4BO15327 924 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 NUAK1O60285 661 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 DNAJC6O75061 913 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 ASMTLO95671 621 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 SLC4A1P02730 911 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 ATP1A1P05023 1023 aaKnown RBP14.15□□□□□ -0.14
HDDC2-206ENST00000608461 PNLIPP16233 465 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 ADCY8P40145 1251 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 GNPDA1P46926 289 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 POLD2P49005 469 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 CDH17Q12864 832 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 LDLRAP1Q5SW96 308 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 GSTA5Q7RTV2 222 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 PRELID2Q8N945 189 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 GPR156Q8NFN8 814 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 ZCCHC2Q9C0B9 1178 aaKnown RBP14.15□□□□□ -0.14
HDDC2-206ENST00000608461 ETNK1Q9HBU6 452 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 BPIFA1Q9NP55 256 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 EIF2B3Q9NR50 452 aaKnown RBP14.15□□□□□ -0.14
HDDC2-206ENST00000608461 SMOXQ9NWM0 555 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 PADI4Q9UM07 663 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 U3KQA8 63 aa14.15□□□□□ -0.14
HDDC2-206ENST00000608461 NCOR2Q9Y618 2525 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 GOLGA6L10A0A0M3HER8 536 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 CHUKO15111 745 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 HYAL3O43820 417 aaPredicted RBP14.14□□□□□ -0.15
HDDC2-206ENST00000608461 KCNJ13O60928 360 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 USP12O75317 370 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 LMAN1P49257 510 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 CLCNKAP51800 687 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 CDK16Q00536 496 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 CTBSQ01459 385 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 CYP1B1Q16678 543 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 KCTD16Q68DU8 428 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 SLC35F3Q8IY50 421 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 FAM46DQ8NEK8 389 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 GRAMD1AQ96CP6 724 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 APOL2Q9BQE5 337 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 RAB6BQ9NRW1 208 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 ZNHIT2Q9UHR6 403 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 GPSM3Q9Y4H4 160 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 ZNF106Q9H2Y7 1883 aaKnown RBP14.14□□□□□ -0.15
HDDC2-206ENST00000608461 BPTFQ12830 3046 aa14.14□□□□□ -0.15
HDDC2-206ENST00000608461 PTPRBP23467 1997 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 AGAP14A8MT82 685 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 H7C0S8 307 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 ZW10O43264 779 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 GRID2O43424 1007 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 LDB2O43679 373 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 NUDT21O43809 227 aaKnown RBP14.13□□□□□ -0.15
HDDC2-206ENST00000608461 CELA2BP08218 269 aaPredicted RBP14.13□□□□□ -0.15
HDDC2-206ENST00000608461 GLB1P16278 677 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 PSMA3P25788 255 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 RPL22P35268 128 aaKnown RBP14.13□□□□□ -0.15
HDDC2-206ENST00000608461 GNG11P61952 73 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 SPARCL1Q14515 664 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 ATP13A5Q4VNC0 1218 aa14.13□□□□□ -0.15
HDDC2-206ENST00000608461 ARMC3Q5W041 872 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms