RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CLPPQ16740 277 aaPredicted RBP14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 PYCR3Q53H96 274 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 BROXQ5VW32 411 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 FOXR1Q6PIV2 292 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 RAD9BQ6WBX8 426 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 NYAP1Q6ZVC0 841 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 B4GALNT4Q76KP1 1039 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 TRIM74Q86UV6 250 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 SPC24Q8NBT2 197 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 ACRBPQ8NEB7 543 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 TMEM159Q96B96 161 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 TADA1Q96BN2 335 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 COX14Q96I36 57 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 FCRL5Q96RD9 977 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 EPB41L5Q9HCM4 733 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 SATB2Q9UPW6 733 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 PCDHGA8Q9Y5G5 932 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 ENTPD2Q9Y5L3 495 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 RNF215Q9Y6U7 377 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 LRRK1Q38SD2 2015 aa14.3□□□□□ -0.12
PKNOX1-210ENST00000607049 URB1O60287 2271 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 PKD1L2Q7Z442 2459 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 ECEL1O95672 775 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 ATP1A1P05023 1023 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 FGF1P05230 155 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 PIRTP0C851 137 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 AK4P27144 223 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 PTPN7P35236 360 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 GPR3P46089 330 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 GEMP55040 296 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 WNT3AP56704 352 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 GSDMDP57764 484 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 COL28A1Q2UY09 1125 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 ALS2CLQ60I27 953 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 IGF2-ASQ6U949 168 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 CHST15Q7LFX5 561 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 TMC3Q7Z5M5 1100 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 SPRED1Q7Z699 444 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 PIM3Q86V86 326 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 ZNF567Q8N184 647 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 TRAM1L1Q8N609 369 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 AVL9Q8NBF6 648 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 TTC13Q8NBP0 860 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 LIN37Q96GY3 246 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 AGAP2Q99490 1192 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 ZMYND15Q9H091 742 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 CARD9Q9H257 536 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 NFKBIL1Q9UBC1 381 aaPredicted RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 AAR2Q9Y312 384 aaKnown RBP14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 PKP3Q9Y446 797 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 DUSP10Q9Y6W6 482 aa14.29□□□□□ -0.12
PKNOX1-210ENST00000607049 RCCD1A6NED2 376 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 CPNE6O95741 557 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 FUCA1P04066 466 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 JMJD7P0C870 316 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 ALDH4A1P30038 563 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 CCKBRP32239 447 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 OTUD4Q01804 1114 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 ADCY2Q08462 1091 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 NOMO1Q15155 1222 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 RAB11FIP2Q7L804 512 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 NRROSQ86YC3 692 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 FBXO39Q8N4B4 442 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 SLC25A41Q8N5S1 370 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 GDAP1Q8TB36 358 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 ACTL9Q8TC94 416 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 GLYATL1Q969I3 302 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 SH3KBP1Q96B97 665 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 SLC46A1Q96NT5 459 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 PLEKHG4BQ96PX9 1271 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 CMKLR1Q99788 373 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 DPYSL5Q9BPU6 564 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 TSGA10Q9BZW7 698 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 ZCCHC2Q9C0B9 1178 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 LACRTQ9GZZ8 138 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 TRIM39Q9HCM9 518 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 RABGEF1Q9UJ41 708 aa14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 REXO2Q9Y3B8 237 aaKnown RBP14.28□□□□□ -0.12
PKNOX1-210ENST00000607049 FREM2Q5SZK8 3169 aa14.27□□□□□ -0.12
PKNOX1-210ENST00000607049 LOC285095A0A1B0GVY8 99 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 OR5K4A6NMS3 321 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 FADS2P1A8MWK0 482 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 PLD2O14939 933 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 GRID2O43424 1007 aa14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 TLX3O43711 291 aaPredicted RBP14.27□□□□□ -0.13
PKNOX1-210ENST00000607049 NRDCO43847 1150 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms