RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 TBL1YQ9BQ87 522 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 TRIM39Q9HCM9 518 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 PAK5Q9P286 719 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
TPM4-207ENST00000588032 PADI4Q9UM07 663 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 SUFUQ9UMX1 484 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 GPR34Q9UPC5 381 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 TMEM98Q9Y2Y6 226 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 FRYLO94915 3013 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 SPTBN4Q9H254 2564 aa10.03□□□□□ -0.8
TPM4-207ENST00000588032 LY6G6EA0A0G2JKS1 128 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 CES2O00748 559 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 VEGFDO43915 354 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 AP2A1O95782 977 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 GAS8O95995 478 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 IFNB1P01574 187 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 SLC4A1P02730 911 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 JUPP14923 745 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 CXCR5P32302 372 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 SPAM1P38567 509 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 ADCY8P40145 1251 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 HADHAP40939 763 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 POLD2P49005 469 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
TPM4-207ENST00000588032 SNX1Q13596 522 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 ITGA9Q13797 1035 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 SIX1Q15475 284 aaPredicted RBP10.02□□□□□ -0.81
TPM4-207ENST00000588032 ALS2CLQ60I27 953 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 KCTD16Q68DU8 428 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 DENND5AQ6IQ26 1287 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 DOK6Q6PKX4 331 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.81
TPM4-207ENST00000588032 GALNT13Q8IUC8 556 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 PHYKPLQ8IUZ5 450 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 SLC35F3Q8IY50 421 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 RASGEF1CQ8N431 466 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
TPM4-207ENST00000588032 ABCG4Q9H172 646 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 DPEP2Q9H4A9 486 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 CAAP1Q9H8G2 361 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 BPIFA1Q9NP55 256 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 IL26Q9NPH9 171 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 TRMT1Q9NXH9 659 aaKnown RBP10.02□□□□□ -0.81
TPM4-207ENST00000588032 GULP1Q9UBP9 304 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 ZNHIT2Q9UHR6 403 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 APPL1Q9UKG1 709 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 GPSM3Q9Y4H4 160 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 U3KQA8 63 aa10.02□□□□□ -0.81
TPM4-207ENST00000588032 GLYATL1P3A0A0U1RQE8 302 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 CPED1A4D0V7 1026 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 E7EVH7 732 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 ZW10O43264 779 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 NUAK1O60285 661 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 OPA1O60313 960 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 DNAJC6O75061 913 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 TOP3BO95985 862 aaKnown RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 ATP1A1P05023 1023 aaKnown RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 PNLIPP16233 465 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 LMAN1P49257 510 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 CTBSQ01459 385 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 LAMB3Q13751 1172 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 SPARCL1Q14515 664 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 EFL1Q7Z2Z2 1120 aaKnown RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 TRIM74Q86UV6 250 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 SLC35F6Q8N357 371 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 GPR156Q8NFN8 814 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 CCL4L1Q8NHW4 92 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 IFI44Q8TCB0 444 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 GRAMD1AQ96CP6 724 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 TTC25Q96NG3 672 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 APOL2Q9BQE5 337 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 ETNK1Q9HBU6 452 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 TAAR2Q9P1P5 351 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 ATXN10Q9UBB4 475 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 KLK13Q9UKR3 277 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 ARL5AQ9Y689 179 aa10.01□□□□□ -0.81
TPM4-207ENST00000588032 OAS3Q9Y6K5 1087 aaKnown RBP10.01□□□□□ -0.81
TPM4-207ENST00000588032 DMXL1Q9Y485 3027 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CNOT1A5YKK6 2376 aaKnown RBP10□□□□□ -0.81
TPM4-207ENST00000588032 TMEM8BA6NDV4 472 aa10□□□□□ -0.81
TPM4-207ENST00000588032 AP3B1O00203 1094 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CHUKO15111 745 aa10□□□□□ -0.81
TPM4-207ENST00000588032 GRID2O43424 1007 aa10□□□□□ -0.81
TPM4-207ENST00000588032 NUDT21O43809 227 aaKnown RBP10□□□□□ -0.81
TPM4-207ENST00000588032 NOBOXO60393 691 aa10□□□□□ -0.81
TPM4-207ENST00000588032 KCNJ13O60928 360 aa10□□□□□ -0.81
TPM4-207ENST00000588032 USP12O75317 370 aa10□□□□□ -0.81
TPM4-207ENST00000588032 SUN1O94901 812 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CDK14O94921 469 aa10□□□□□ -0.81
TPM4-207ENST00000588032 GLB1P16278 677 aa10□□□□□ -0.81
TPM4-207ENST00000588032 TCP1P17987 556 aaKnown RBP10□□□□□ -0.81
TPM4-207ENST00000588032 SPINK2P20155 84 aa10□□□□□ -0.81
TPM4-207ENST00000588032 CLCNKAP51800 687 aa10□□□□□ -0.81
TPM4-207ENST00000588032 INSM1Q01101 510 aaPredicted RBP10□□□□□ -0.81
TPM4-207ENST00000588032 CDH17Q12864 832 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms