RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 USP12O75317 370 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 KRT37O76014 449 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 FGF1P05230 155 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 PIRTP0C851 137 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 ACTN2P35609 894 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 GEMP55040 296 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 TRIM74Q86UV6 250 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 C17orf82Q86X59 251 aaPredicted RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 NRROSQ86YC3 692 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 MRGPRX2Q96LB1 330 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 GFM1Q96RP9 751 aaKnown RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 SPATA16Q9BXB7 569 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.08■■□□□ 1.29
CHFR-222ENST00000544093 TRIM10Q9UDY6 481 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 CNOT6Q9ULM6 557 aaKnown RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 AAR2Q9Y312 384 aaKnown RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 PCDHB1Q9Y5F3 818 aa23.08■■□□□ 1.29
CHFR-222ENST00000544093 COL27A1Q8IZC6 1860 aaPredicted RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 URB1O60287 2271 aaKnown RBP23.08■■□□□ 1.29
CHFR-222ENST00000544093 FADS2P1A8MWK0 482 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 LSSP48449 732 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 PRPSAP1Q14558 356 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 SLC1A5Q15758 541 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 SIRPB2Q5JXA9 342 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 DARS2Q6PI48 645 aaKnown RBP23.07■■□□□ 1.28
CHFR-222ENST00000544093 SLC30A9Q6PML9 568 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 CCNJLQ8IV13 435 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 IPMKQ8NFU5 416 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 DTX3LQ8TDB6 740 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 PTCD2Q8WV60 388 aaKnown RBP23.07■■□□□ 1.28
CHFR-222ENST00000544093 LRRC45Q96CN5 670 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 OXNAD1Q96HP4 312 aaPredicted RBP23.07■■□□□ 1.28
CHFR-222ENST00000544093 HES6Q96HZ4 224 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 HERPUD2Q9BSE4 406 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 CARD9Q9H257 536 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 SYNDIG1Q9H7V2 258 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 POLR1BQ9H9Y6 1135 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 SPATS2LQ9NUQ6 558 aaKnown RBP23.07■■□□□ 1.28
CHFR-222ENST00000544093 LRIT1Q9P2V4 623 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 RAXQ9Y2V3 346 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 ADGRG1Q9Y653 693 aa23.07■■□□□ 1.28
CHFR-222ENST00000544093 CHD6Q8TD26 2715 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 PPFIA2O75334 1257 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 DXOO77932 396 aaKnown RBP23.06■■□□□ 1.28
CHFR-222ENST00000544093 SLC4A1P02730 911 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 AK4P27144 223 aaPredicted RBP23.06■■□□□ 1.28
CHFR-222ENST00000544093 ACTR1BP42025 376 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 ACTR1AP61163 376 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 BIRC2Q13490 618 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 FAM182AQ5T1J6 154 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 MARK2Q7KZI7 788 aaKnown RBP23.06■■□□□ 1.28
CHFR-222ENST00000544093 PHYKPLQ8IUZ5 450 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 GPR26Q8NDV2 337 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 LRRN3Q9H3W5 708 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 ZNHIT2Q9UHR6 403 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 ENTPD2Q9Y5L3 495 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 SCN8AQ9UQD0 1980 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 CFAP47Q6ZTR5 3102 aa23.06■■□□□ 1.28
CHFR-222ENST00000544093 KCNN4O15554 427 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 BRINP1O60477 761 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 DNAJC6O75061 913 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 SLC25A14O95258 325 aaPredicted RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 FTCDO95954 541 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 ATP1A1P05023 1023 aaKnown RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 RPLP0P05388 317 aaKnown RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 GABREP78334 506 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 EIF3IQ13347 325 aaKnown RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 CLPPQ16740 277 aaPredicted RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 ANKRD20A2Q5SQ80 823 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 ANKRD20A1Q5TYW2 823 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 ANKRD20A3Q5VUR7 823 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 ALS2CLQ60I27 953 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 IGF2-ASQ6U949 168 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 ZNF578Q96N58 590 aaPredicted RBP23.05■■□□□ 1.28
CHFR-222ENST00000544093 SPATA13Q96N96 652 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 STRADBQ9C0K7 418 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 TRIM39Q9HCM9 518 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 RABGEF1Q9UJ41 708 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 SPO11Q9Y5K1 396 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 CAPN6Q9Y6Q1 641 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 RNF215Q9Y6U7 377 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 UNC13CQ8NB66 2214 aa23.05■■□□□ 1.28
CHFR-222ENST00000544093 A0A087WV48 116 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 RHPN2P1A8MT19 583 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 D6RAR5 112 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 DDX3YO15523 660 aaKnown RBP23.04■■□□□ 1.28
CHFR-222ENST00000544093 NRDCO43847 1150 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 NUAK1O60285 661 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 BPIP17213 487 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 MLLT3P42568 568 aaPredicted RBP23.04■■□□□ 1.28
CHFR-222ENST00000544093 GPR3P46089 330 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 CCL7P80098 99 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 NR1D2Q14995 579 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 TBC1D25Q3MII6 688 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 GLT6D1Q7Z4J2 308 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 ZNF438Q7Z4V0 828 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 SPRED1Q7Z699 444 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 SNIP1Q8TAD8 396 aaKnown RBP23.04■■□□□ 1.28
CHFR-222ENST00000544093 FGF11Q92914 225 aa23.04■■□□□ 1.28
CHFR-222ENST00000544093 GLYATL1Q969I3 302 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms