RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ANKRD2Q9GZV1 360 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 SPRTNQ9H040 489 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 USP44Q9H0E7 712 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 MAP6D1Q9H9H5 199 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 MAGEE1Q9HCI5 957 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ASAH2Q9NR71 780 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 SIRT3Q9NTG7 399 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 MKLN1Q9UL63 735 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 CORO1CQ9ULV4 474 aaPredicted RBP4.33□□□□□ -1.72
HTT-210ENST00000512909 PSAT1Q9Y617 370 aa4.33□□□□□ -1.72
HTT-210ENST00000512909 ADCY9O60503 1353 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 KDM3AQ9Y4C1 1321 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 A0A1W2PRG0 241 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 PSMD14O00487 310 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 IPO8O15397 1037 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 GPC4O75487 556 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 SEC31AO94979 1220 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 CLDN7O95471 211 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 BMP15O95972 392 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 ZNF182P17025 639 aaPredicted RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 NAGAP17050 411 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 ALOX12P18054 663 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 RPL3P39023 403 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 RASSF2P50749 326 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 DRG2P55039 364 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 P2RX3P56373 397 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 TFAP4Q01664 338 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 SRSF1Q07955 248 aaKnown RBP eCLIP4.32□□□□□ -1.72
HTT-210ENST00000512909 PRKG2Q13237 762 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 NAB2Q15742 525 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 HSPB2Q16082 182 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 ESCO2Q56NI9 601 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 SLC45A4Q5BKX6 768 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 BEND3Q5T5X7 828 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 NUGGCQ68CJ6 796 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 TXNDC8Q6A555 127 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 TYW3Q6IPR3 259 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 SARM1Q6SZW1 724 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 USP50Q70EL3 339 aaPredicted RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 PCGF5Q86SE9 256 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 GPSM1Q86YR5 675 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 TICAM1Q8IUC6 712 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 RBFAQ8N0V3 343 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 TAGAPQ8N103 731 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 KDM1BQ8NB78 822 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 JAKMIP2Q96AA8 810 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 LBHD1Q9BQE6 289 aaPredicted RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 NUDT16L1Q9BRJ7 211 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 IFIH1Q9BYX4 1025 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 NDST4Q9H3R1 872 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 KLHL31Q9H511 634 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 CYSLTR2Q9NS75 346 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
HTT-210ENST00000512909 VPS28Q9UK41 221 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 MAU2Q9Y6X3 613 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 A3GALT2U3KPV4 340 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 ADAMTS7Q9UKP4 1686 aa4.32□□□□□ -1.72
HTT-210ENST00000512909 IBTKQ9P2D0 1353 aaPredicted RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 CDHR2Q9BYE9 1310 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 DNAJC9-AS1A6NH13 148 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 YDJCA8MPS7 323 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 B4DGG1 531 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 EPN2O95208 641 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CELF2O95319 508 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 MMP2P08253 660 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 PSG1P11464 419 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 IL7RP16871 459 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 SRD5A1P18405 259 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CDH2P19022 906 aaPredicted RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 CHATP28329 748 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 MLH1P40692 756 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CLDN2P57739 230 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 SNX16P57768 344 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 DSC1Q08554 894 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 FAM27E3Q08E93 113 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 ST3GAL1Q11201 340 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CSTF3Q12996 717 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 CHAF1BQ13112 559 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 OLIG2Q13516 323 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 NAE1Q13564 534 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CFAP58Q5T655 872 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 ZKSCAN2Q63HK3 967 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 KLHL35Q6PF15 583 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 NCEH1Q6PIU2 408 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 DLK2Q6UY11 383 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 TRILQ7L0X0 811 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 FASTKD5Q7L8L6 764 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 DHX40Q8IX18 779 aaKnown RBP4.31□□□□□ -1.72
HTT-210ENST00000512909 TMEM116Q8NCL8 245 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 OR14A16Q8NHC5 309 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 TMEM163Q8TC26 289 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 USP6NLQ92738 828 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 MTBPQ96DY7 904 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CALML4Q96GE6 196 aa4.31□□□□□ -1.72
HTT-210ENST00000512909 CMTM3Q96MX0 182 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms