RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 LRRC40Q9H9A6 602 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 ARNT2Q9HBZ2 717 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 RAD18Q9NS91 495 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 HOMER3Q9NSC5 361 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 NLGN3Q9NZ94 848 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 TTC7AQ9ULT0 858 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 SNX12Q9UMY4 172 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 SLC17A4Q9Y2C5 497 aa11.18□□□□□ -0.62
ERCC8-208ENST00000497892 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 GOLGA4Q13439 2230 aaKnown RBP11.18□□□□□ -0.62
ERCC8-208ENST00000497892 PRSS38A1L453 326 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 ERI2A8K979 691 aaKnown RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 FADS2P1A8MWK0 482 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 LMO7DNF2Z398 122 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 PGRMC1O00264 195 aaKnown RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 CES2O00748 559 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 TPP1O14773 563 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 SIGLEC6O43699 453 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 USP12O75317 370 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 DKK1O94907 266 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 AP2A1O95782 977 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 IFNB1P01574 187 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 CEACAM5P06731 702 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 FTH1P19P0C7X4 201 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 ALPPL2P10696 532 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 BPIP17213 487 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 FOXK2Q01167 660 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 ALS2CLQ60I27 953 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 RD3Q7Z3Z2 195 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 CCDC89Q8N998 374 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 GLIS1Q8NBF1 620 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 LMX1AQ8TE12 382 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 COG1Q8WTW3 980 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 COX14Q96I36 57 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 MS4A14Q96JA4 679 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 TBL1YQ9BQ87 522 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 ZSCAN5AQ9BUG6 496 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 CLPBQ9H078 707 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 MRPL40Q9NQ50 206 aaKnown RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 EVA1BQ9NVM1 165 aa11.17□□□□□ -0.62
ERCC8-208ENST00000497892 FEZ2Q9UHY8 353 aaPredicted RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 DRG1Q9Y295 367 aaKnown RBP11.17□□□□□ -0.62
ERCC8-208ENST00000497892 INPP4BO15327 924 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 PSMD3O43242 534 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 PPFIA2O75334 1257 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 TNFP01375 233 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 CELA2BP08218 269 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ACTN2P35609 894 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 GNG11P61952 73 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 MSLNQ13421 630 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 C1orf61Q13536 156 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 SEMA5AQ13591 1074 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 SPARCL1Q14515 664 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ELOCQ15369 112 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ZDHHC20Q5W0Z9 365 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ZCCHC8Q6NZY4 707 aaKnown RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 PRUNE1Q86TP1 453 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 TRAM1L1Q8N609 369 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 FAM181AQ8N9Y4 354 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 DTX3LQ8TDB6 740 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ACTRT1Q8TDG2 376 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 SCARF2Q96GP6 870 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 NAP1L3Q99457 506 aaPredicted RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 DUSP23Q9BVJ7 150 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 CARS2Q9HA77 564 aaKnown RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 CYP4F12Q9HCS2 524 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 KCND1Q9NSA2 647 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 IL17CQ9P0M4 197 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 VPS18Q9P253 973 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 PAK5Q9P286 719 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 CNOT6Q9ULM6 557 aaKnown RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 APOBEC2Q9Y235 224 aaKnown RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 BPTFQ12830 3046 aa11.16□□□□□ -0.62
ERCC8-208ENST00000497892 ZFC3H1O60293 1989 aaKnown RBP11.16□□□□□ -0.62
ERCC8-208ENST00000497892 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SUN1O94901 812 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 FUCA1P04066 466 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 IVLP07476 585 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 CTSEP14091 401 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 ETS1P14921 441 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 CKMT2P17540 419 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 TCP1P17987 556 aaKnown RBP11.15□□□□□ -0.62
ERCC8-208ENST00000497892 PMLP29590 882 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 FDFT1P37268 417 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SPAM1P38567 509 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 POLD2P49005 469 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 ACADVLP49748 655 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SH3BP2P78314 561 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 DNAJC3Q13217 504 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms