RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 GOLGA4Q13439 2230 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 TRABD2BA6NFA1 517 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 C2orf81A6NN90 581 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 STX7O15400 261 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 PSMD3O43242 534 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 AK4P27144 223 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 STIP1P31948 543 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 ACTR1BP42025 376 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 ACTR1AP61163 376 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 CTBSQ01459 385 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 SNX1Q13596 522 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 P3H1Q32P28 736 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 PDPK2PQ6A1A2 396 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 CHST15Q7LFX5 561 aaPredicted RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 SLC35B2Q8TB61 432 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 ZDHHC1Q8WTX9 485 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 MAIP1Q8WWC4 291 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 ATG4AQ8WYN0 398 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 PLEKHG4BQ96PX9 1271 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 DEPDC7Q96QD5 511 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 TBL1YQ9BQ87 522 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 CCDC3Q9BQI4 270 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 CCDC86Q9H6F5 360 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 RMI1Q9H9A7 625 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 ARFGAP3Q9NP61 516 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 TAAR2Q9P1P5 351 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 VPS18Q9P253 973 aa17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 CNOT6Q9ULM6 557 aaKnown RBP17.93■□□□□ 0.46
PDLIM2-215ENST00000456545 PLXNB3Q9ULL4 1909 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 ZSCAN12O43309 604 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 BUD23O43709 281 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 SPAM1P38567 509 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 LMAN1P49257 510 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 SPARCL1Q14515 664 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 C14orf28Q4W4Y0 310 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 PYCR3Q53H96 274 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 PERM1Q5SV97 790 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 OGFOD3Q6PK18 319 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 RANBP10Q6VN20 620 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 PHYKPLQ8IUZ5 450 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 TAB3Q8N5C8 712 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 WDR48Q8TAF3 677 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 PTCD2Q8WV60 388 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 C1orf54Q8WWF1 131 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 ZCCHC14Q8WYQ9 949 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 GLYATL1Q969I3 302 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 SCARF2Q96GP6 870 aaPredicted RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 TTC25Q96NG3 672 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 TRIM39Q9HCM9 518 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 SPATS2LQ9NUQ6 558 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 PRKAB1Q9Y478 270 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 OAS3Q9Y6K5 1087 aaKnown RBP17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 AK5Q9Y6K8 562 aa17.92■□□□□ 0.46
PDLIM2-215ENST00000456545 ZW10O43264 779 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 LIASO43766 372 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 CEP104O60308 925 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 PPFIA2O75334 1257 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 CRTAMO95727 393 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 IFNB1P01574 187 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 LPOP22079 712 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 PDE1BQ01064 536 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 GTF2H3Q13889 308 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 LRP8Q14114 963 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 NRROSQ86YC3 692 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 CACTIN-AS1Q8N1I8 211 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 TTC30BQ8N4P2 665 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 GPR156Q8NFN8 814 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 CCDC74AQ96AQ1 378 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 OR2AG1Q9H205 316 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 IL17CQ9P0M4 197 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 LRIT1Q9P2V4 623 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 ATXN10Q9UBB4 475 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 NFKBIL1Q9UBC1 381 aaPredicted RBP17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 PLEKHM1Q9Y4G2 1056 aa17.91■□□□□ 0.46
PDLIM2-215ENST00000456545 GLYATL1P3A0A0U1RQE8 302 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 RHPN2P1A8MT19 583 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 E7EVH7 732 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 GRID2O43424 1007 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 USP12O75317 370 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 GLB1P16278 677 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 ADRA1AP35348 466 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 PPM1FP49593 454 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 GDF10P55107 478 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 OLIG2Q13516 323 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 SPIDRQ14159 915 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 TAF1AQ15573 450 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 LONRF2Q1L5Z9 754 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 ZNF648Q5T619 568 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 RBM44Q6ZP01 1051 aaKnown RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 DCBLD1Q8N8Z6 715 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 CCDC89Q8N998 374 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 Q8N9G6 341 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 BRSK1Q8TDC3 778 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 GORASP1Q9BQQ3 440 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 TMEM121BQ9BXQ6 578 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 LRRC40Q9H9A6 602 aa17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 FEZ2Q9UHY8 353 aaPredicted RBP17.9■□□□□ 0.46
PDLIM2-215ENST00000456545 NUAK1O60285 661 aa17.89■□□□□ 0.45
PDLIM2-215ENST00000456545 NOBOXO60393 691 aa17.89■□□□□ 0.45
PDLIM2-215ENST00000456545 DNAJC6O75061 913 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms