RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 SNX10Q9Y5X0 201 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ATXN2Q99700 1313 aaKnown RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 FAM227AF5H4B4 570 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 RIPK2O43353 540 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ACP5P13686 325 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 SLC7A1P30825 629 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 RPL6Q02878 288 aaKnown RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 TEAD2Q15562 447 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 SH3GL2Q99962 352 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 BHLHE41Q9C0J9 482 aaPredicted RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 NKX2-4Q9H2Z4 354 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 PCDHGC4Q9Y5F7 938 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 BANF1O75531 89 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 TRBC1P01850 177 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ITGA2P17301 1181 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ITGB5P18084 799 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ITGA3P26006 1051 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 DDX6P26196 483 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 GRIA4P48058 902 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ACTR3P61158 418 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 CHERPQ8IWX8 916 aaKnown RBP12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 OR2AG1Q9H205 316 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 CHST7Q9NS84 486 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 CYP8B1Q9UNU6 501 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
AC006001.3-201ENST00000449307 A0A1B0GVM2 712 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 TCAF2A6NFQ2 919 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 NOL4O94818 638 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 PRAMEF1O95521 474 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CEP44Q9C0F1 390 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 WDR26Q9H7D7 661 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 ADGRA3Q8IWK6 1321 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 LIN7AO14910 233 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 PRKCGP05129 697 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CFHP08603 1231 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CPTPQ5TA50 214 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 ARHGAP40Q5TG30 622 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 GPR180Q86V85 440 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 TSEN15Q8WW01 171 aaKnown RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CRTAC1Q9NQ79 661 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 TCRBV21S2A2A0A5A6 115 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 FAM25EA8MYX2 175 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 PSMD11O00231 422 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 RPP40O75818 363 aaKnown RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 FGF18O76093 207 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CYB5AP00167 134 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CDK7P50613 346 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 PKNOX1P55347 436 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CACNG1Q06432 222 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 NEDD8Q15843 81 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 TRIM16LQ309B1 348 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 DNAJB7Q7Z6W7 309 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 SLC35C1Q96A29 364 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 TPRKBQ9Y3C4 175 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 EPHB6O15197 1021 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 DBIP07108 87 aaKnown RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CLCN7P51798 805 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 GNA12Q03113 381 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 RNF31Q96EP0 1072 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CMTM6Q9NX76 183 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 HCN4Q9Y3Q4 1203 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 AXIN1O15169 862 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 RECQL5O94762 991 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 DSC2Q02487 901 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 HSPB3Q12988 150 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 SAPCD2Q86UD0 394 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 FAM84AQ96KN4 292 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 SEMA4AQ9H3S1 761 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
AC006001.3-201ENST00000449307 CAPN14A8MX76 684 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 UGT2B17O75795 530 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 CCND1P24385 295 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 MAPK12P53778 367 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 NTRK3Q16288 839 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 GALNTL5Q7Z4T8 443 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 AMIGO1Q86WK6 493 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 RTL3Q8N8U3 475 aaKnown RBP12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 MR1Q95460 341 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 EBNA1BP2Q99848 306 aaKnown RBP12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 IKZF3Q9UKT9 509 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 LOC100506127A0A0U1RQW1 187 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 C9IYK1 514 aa12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 TLX3O43711 291 aaPredicted RBP12.67□□□□□ -0.38
AC006001.3-201ENST00000449307 CBX5P45973 191 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms