RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 COL1A1P02452 1464 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SNPHO15079 494 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 PGK1P00558 417 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 TCF3P15923 654 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 HTR7P34969 479 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SLC5A3P53794 718 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IRF9Q00978 393 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 CCNYL2Q5T2Q4 361 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 KIAA0930Q6ICG6 404 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SDE2Q6IQ49 451 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 UTS2BQ765I0 119 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 GPR142Q7Z601 462 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ST13P5Q8NFI4 369 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ZDHHC6Q9H6R6 413 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 LRTM1Q9HBL6 345 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 KCNE2Q9Y6J6 123 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SESN1Q9Y6P5 492 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SF3B1O75533 1304 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■■ 133.7
PTCH1-203ENST00000375274 A0A1W2PQH9 124 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SLC7A4O43246 635 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IDH3BO43837 385 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IL6P05231 212 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IGFBP5P24593 272 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 PRKAG1P54619 331 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 VN1R5Q7Z5H4 357 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 GALNT5Q7Z7M9 940 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ENDOVQ8N8Q3 282 aaKnown RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 GPR152Q8TDT2 470 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 HPS1Q92902 700 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 PCED1BQ96HM7 432 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 APOLD1Q96LR9 279 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 QRFPRQ96P65 431 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 YME1L1Q96TA2 773 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ZNF624Q9P2J8 865 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ANGPT4Q9Y264 503 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 UBXN8O00124 270 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 BCKDKO14874 412 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 CYP7B1O75881 506 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 HDCP19113 662 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 EPORP19235 508 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 PPIBP23284 216 aaKnown RBP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 GSTM5P46439 218 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SPIBQ01892 262 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 PARP15Q460N3 678 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 ALFQ53S48 1182 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IRGQQ8WZA9 623 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 NODALQ96S42 347 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCH1-203ENST00000375274 IPPKQ9H8X2 491 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 EURLQ9NYK6 297 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 FBXW11Q9UKB1 542 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 GTF2A1LQ9UNN4 478 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 SNX10Q9Y5X0 201 aa11.49□□□□□ -0.57
PTCH1-203ENST00000375274 MYBPHLA2RUH7 354 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 UGT2B11O75310 529 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 UROSP10746 265 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 NCK1P16333 377 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PRKCHP24723 683 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ARL4DP49703 201 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 OLR1P78380 273 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 MOGSQ13724 837 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PPM1LQ5SGD2 360 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TAPT1Q6NXT6 567 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 MZT2BQ6NZ67 158 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TRIM40Q6P9F5 258 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 NEK10Q6ZWH5 1172 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TMEM110Q86TL2 294 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CACTIN-AS1Q8N1I8 211 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 UBE2E3Q969T4 207 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ASB9Q96DX5 294 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 OGDHLQ9ULD0 1010 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ZNF490Q9ULM2 529 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 FMN2Q9NZ56 1722 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 RGS10O43665 173 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 DNAJA2O60884 412 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 RNASEH1O60930 286 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 TULP3O75386 442 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 MAGP20916 626 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 RPL3P39023 403 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CAPGP40121 348 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 SLC1A2P43004 574 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 HERC3Q15034 1050 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 LYPLAL1Q5VWZ2 237 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 ARMC8Q8IUR7 673 aa11.48□□□□□ -0.57
PTCH1-203ENST00000375274 PNPT1Q8TCS8 783 aaKnown RBP11.48□□□□□ -0.57
PTCH1-203ENST00000375274 CANT1Q8WVQ1 401 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms