RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CCDC70Q6NSX1 233 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 MARK2Q7KZI7 788 aaKnown RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 CDKL3Q8IVW4 592 aaPredicted RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 TTC30BQ8N4P2 665 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 UBL4BQ8N7F7 174 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 OR6C4Q8NGE1 309 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 OR2M4Q96R27 311 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 SRPK1Q96SB4 655 aaKnown RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 GPR63Q9BZJ6 419 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 CDH19Q9H159 772 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 APPL1Q9UKG1 709 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 RAXQ9Y2V3 346 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 ENTPD2Q9Y5L3 495 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 RNF215Q9Y6U7 377 aa18.8■□□□□ 0.6
CKS1B-203ENST00000368439 ZNF106Q9H2Y7 1883 aaKnown RBP18.8■□□□□ 0.6
CKS1B-203ENST00000368439 ARHGAP6O43182 974 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 PNLIPP16233 465 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 HMGCLP35914 325 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 CETN2P41208 172 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 SLC1A5Q15758 541 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 ANKRD20A2Q5SQ80 823 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 ANKRD20A1Q5TYW2 823 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 ANKRD20A3Q5VUR7 823 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 ALS2CLQ60I27 953 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 SLC30A9Q6PML9 568 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 RBM44Q6ZP01 1051 aaKnown RBP18.79■□□□□ 0.6
CKS1B-203ENST00000368439 NAGSQ8N159 534 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 SLC25A41Q8N5S1 370 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 TRAM1L1Q8N609 369 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 IPMKQ8NFU5 416 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 WDR48Q8TAF3 677 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 ZDHHC1Q8WTX9 485 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 GPSM3Q9Y4H4 160 aa18.79■□□□□ 0.6
CKS1B-203ENST00000368439 TCRBV7S2A1N4TA0A589 114 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 KCNN4O15554 427 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 NUDT21O43809 227 aaKnown RBP18.78■□□□□ 0.6
CKS1B-203ENST00000368439 USP12O75317 370 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 SLC4A1P02730 911 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 HLA-DPA1P20036 260 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 ADRA1AP35348 466 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 MAZP56270 477 aaKnown RBP18.78■□□□□ 0.6
CKS1B-203ENST00000368439 CCL7P80098 99 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 DARS2Q6PI48 645 aaKnown RBP18.78■□□□□ 0.6
CKS1B-203ENST00000368439 GALNT13Q8IUC8 556 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 KLHDC8BQ8IXV7 354 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 PATE1Q8WXA2 126 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 ZSCAN5AQ9BUG6 496 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 SPATA16Q9BXB7 569 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 TRABDQ9H4I3 376 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 RAD18Q9NS91 495 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 LRIT1Q9P2V4 623 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 TMPRSS11EQ9UL52 423 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 AK5Q9Y6K8 562 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 BPTFQ12830 3046 aa18.78■□□□□ 0.6
CKS1B-203ENST00000368439 CHD6Q8TD26 2715 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ADAMTS20P59510 1910 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 TLX3O43711 291 aaPredicted RBP18.77■□□□□ 0.6
CKS1B-203ENST00000368439 BRINP1O60477 761 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ANXA9O76027 345 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ASMTLO95671 621 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ECEL1O95672 775 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 AGTP01019 485 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 RPLP0P05388 317 aaKnown RBP18.77■□□□□ 0.6
CKS1B-203ENST00000368439 PSMB4P28070 264 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ACTR1BP42025 376 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 GEMP55040 296 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ACTR1AP61163 376 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 LRP8Q14114 963 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 SPIDRQ14159 915 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ZNF648Q5T619 568 aaPredicted RBP18.77■□□□□ 0.6
CKS1B-203ENST00000368439 PDPK2PQ6A1A2 396 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ITPRIPL1Q6GPH6 555 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 RANBP10Q6VN20 620 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ZNF438Q7Z4V0 828 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 LRRC8AQ8IWT6 810 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 CCDC110Q8TBZ0 833 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 GRAMD1AQ96CP6 724 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ATXN7L3BQ96GX2 97 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 SPATA13Q96N96 652 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 PLEKHG4BQ96PX9 1271 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 TSGA10Q9BZW7 698 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 LRRN3Q9H3W5 708 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 RMI1Q9H9A7 625 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 BPIFA1Q9NP55 256 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 IL17CQ9P0M4 197 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 ATXN10Q9UBB4 475 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 GUCA1BQ9UMX6 200 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 R3HDM2Q9Y2K5 976 aaKnown RBP18.77■□□□□ 0.6
CKS1B-203ENST00000368439 PRKAB1Q9Y478 270 aa18.77■□□□□ 0.6
CKS1B-203ENST00000368439 NUAK1O60285 661 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 MPOP05164 745 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 B4GALNT1Q00973 533 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 MSLNQ13421 630 aaPredicted RBP18.76■□□□□ 0.59
CKS1B-203ENST00000368439 OLIG2Q13516 323 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 NR1D2Q14995 579 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF569Q5MCW4 686 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 ZNF662Q6ZS27 426 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 SPRED1Q7Z699 444 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 ADGRG6Q86SQ4 1221 aa18.76■□□□□ 0.59
CKS1B-203ENST00000368439 CCNJLQ8IV13 435 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms