RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 DEFB103AP81534 67 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 DSC1Q08554 894 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 UPP1Q16831 310 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 KDELC1Q6UW63 502 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 OTOP2Q7RTS6 562 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 ZNF280BQ86YH2 543 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 TERB1Q8NA31 727 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 L3HYPDHQ96EM0 354 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 SMOC2Q9H3U7 446 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 NUDT5Q9UKK9 219 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 COL4A6Q14031 1691 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 PTPRSQ13332 1948 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 A0A1W2PPW3 197 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 ZNF839A8K0R7 811 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 FUCA1P04066 466 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 ODC1P11926 461 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 IMPDH1P20839 514 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 PMS2P3Q13401 168 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 AGKQ53H12 422 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 AARS2Q5JTZ9 985 aaKnown RBP14.66□□□□□ -0.06
PRKN-204ENST00000366896 CENPSQ8N2Z9 138 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 RTL3Q8N8U3 475 aaKnown RBP14.66□□□□□ -0.06
PRKN-204ENST00000366896 GOLM1Q8NBJ4 401 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 HASPINQ8TF76 798 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 CHPT1Q8WUD6 406 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 CANT1Q8WVQ1 401 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 ROPN1LQ96C74 230 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 PHF21BQ96EK2 531 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 FCRL2Q96LA5 508 aaPredicted RBP14.66□□□□□ -0.06
PRKN-204ENST00000366896 ADI1Q9BV57 179 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 PALMDQ9NP74 551 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 MPP6Q9NZW5 540 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 CCDC167Q9P0B6 97 aa14.66□□□□□ -0.06
PRKN-204ENST00000366896 BBIP1A8MTZ0 92 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 K7EPI3 171 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 CCL22O00626 93 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SLC7A4O43246 635 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 MOCS2O96007 188 aaPredicted RBP14.65□□□□□ -0.06
PRKN-204ENST00000366896 TSPAN8P19075 237 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UGT1A6P19224 532 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 CD247P20963 164 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UGT1A1P22309 533 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UGT1A4P22310 534 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UGT1A3P35503 534 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UGT1A5P35504 534 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 HALP42357 657 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 BRCC3P46736 316 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 KCNC4Q03721 635 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 TNK2Q07912 1038 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 RAB39AQ14964 217 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 MAPRE1Q15691 268 aaKnown RBP14.65□□□□□ -0.06
PRKN-204ENST00000366896 MOGQ16653 247 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 FGD3Q5JSP0 725 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 XKR5Q6UX68 686 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 LRRTM3Q86VH5 581 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 DHFR2Q86XF0 187 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 ZNF354CQ86Y25 554 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 CAMK1DQ8IU85 385 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 COLGALT2Q8IYK4 626 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 OR2T34Q8NGX1 318 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 OR2T3Q8NH03 318 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 ANKRD49Q8WVL7 239 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 ITPKCQ96DU7 683 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 ASB2Q96Q27 587 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SLX1AQ9BQ83 275 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 NEURL2Q9BR09 285 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SAC3D1A6NKF1 404 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 TBKBP1A7MCY6 615 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 NRP2O60462 931 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 ADAM23O75077 832 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 FGBP02675 491 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 HOXB8P17481 243 aaPredicted RBP14.65□□□□□ -0.06
PRKN-204ENST00000366896 WNT3AP56704 352 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 MERTKQ12866 999 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SLC36A3Q495N2 470 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SPATS1Q496A3 300 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 GPR107Q5VW38 600 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 OGFOD2Q6N063 350 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 LARP4Q71RC2 724 aaKnown RBP eCLIP14.65□□□□□ -0.06
PRKN-204ENST00000366896 C14orf80Q86SX3 495 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 LDB1Q86U70 411 aaPredicted RBP14.65□□□□□ -0.06
PRKN-204ENST00000366896 OR9I1Q8NGQ6 314 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 FAM110BQ8TC76 370 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 SH3RF2Q8TEC5 729 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 TANKQ92844 425 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 CASP10Q92851 521 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 C1orf74Q96LT6 269 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UROC1Q96N76 676 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 GSTO2Q9H4Y5 243 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 GMPR2Q9P2T1 348 aaKnown RBP14.65□□□□□ -0.06
PRKN-204ENST00000366896 CROTQ9UKG9 612 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 DSEQ9UL01 958 aa14.65□□□□□ -0.06
PRKN-204ENST00000366896 UBFD1O14562 309 aaKnown RBP14.64□□□□□ -0.07
PRKN-204ENST00000366896 GPC4O75487 556 aa14.64□□□□□ -0.07
PRKN-204ENST00000366896 STAMBPO95630 424 aa14.64□□□□□ -0.07
PRKN-204ENST00000366896 YWHAQP27348 245 aa14.64□□□□□ -0.07
PRKN-204ENST00000366896 TMEM240Q5SV17 173 aa14.64□□□□□ -0.07
PRKN-204ENST00000366896 CLEC6AQ6EIG7 209 aa14.64□□□□□ -0.07
PRKN-204ENST00000366896 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms