RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 LTBRP36941 435 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ETFBP38117 255 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 CDH15P55291 814 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ANO4Q32M45 955 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 CCDC80Q76M96 950 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 TMEM25Q86YD3 366 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ARHGAP12Q8IWW6 846 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ZNF781Q8N8C0 355 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 DDHD1Q8NEL9 900 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 RCN3Q96D15 328 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 PLEKHA8Q96JA3 519 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 CNDP1Q96KN2 507 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 NEURL2Q9BR09 285 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 NOL6Q9H6R4 1146 aaKnown RBP12.6□□□□□ -0.39
PRPF6-201ENST00000266079 H0Y626 953 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 J3KR12 359 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 TRIM24O15164 1050 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 FUCA1P04066 466 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ENO3P13929 434 aaPredicted RBP12.6□□□□□ -0.39
PRPF6-201ENST00000266079 KCNA5P22460 613 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 RXRGP48443 463 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 C21orf59P57076 290 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 PAFAH1B3Q15102 231 aaKnown RBP12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ATAT1Q5SQI0 421 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 IL23RQ5VWK5 629 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 CYS1Q717R9 158 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ZNF534Q76KX8 674 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 ATPAF2Q8N5M1 289 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 SGF29Q96ES7 293 aa12.6□□□□□ -0.39
PRPF6-201ENST00000266079 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
PRPF6-201ENST00000266079 NEDD8-MDP1E9PL57 170 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 FOXD2O60548 495 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 MX2P20592 715 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 HCAR3P49019 387 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 CTBSQ01459 385 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 SETD3Q86TU7 594 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 CENPSQ8N2Z9 138 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 WDR41Q9HAD4 459 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 DZANK1Q9NVP4 752 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 PIH1D1Q9NWS0 290 aaKnown RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 TRIM64CA6NLI5 447 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 FGF10O15520 208 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 RAMP2O60895 175 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 HSPA4LO95757 839 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 C1RP00736 705 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 JCHAINP01591 159 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 RHOQP17081 205 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 DPP6P42658 865 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 TNK2Q07912 1038 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 POLD3Q15054 466 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 IL31Q6EBC2 164 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 HTR3CQ8WXA8 447 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 MYADMQ96S97 322 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 MUC3BQ9H195 1237 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 POMKQ9H5K3 350 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 TUBA8Q9NY65 449 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 UBP1Q9NZI7 540 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 CROCCQ5TZA2 2017 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 A0A087WXM4 84 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 RNF103O00237 685 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 ZBTB11O95625 1053 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 GARSP41250 739 aaKnown RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 CDH18Q13634 790 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 LINGO4Q6UY18 593 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 Q6ZNB5 142 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 KDELC2Q7Z4H8 507 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 UNC5BQ8IZJ1 945 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 MYO1HQ8N1T3 1032 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 LEMD2Q8NC56 503 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 ATP6V1E2Q96A05 226 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 SEMA6AQ9H2E6 1030 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 KIAA1522Q9P206 1035 aaPredicted RBP12.59□□□□□ -0.39
PRPF6-201ENST00000266079 SLC17A6Q9P2U8 582 aa12.59□□□□□ -0.39
PRPF6-201ENST00000266079 DENND4CQ5VZ89 1909 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 GOLGA8QA0A0J9YX86 632 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 GOLGA8OA6NCC3 632 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 GOLGA8NF8WBI6 632 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 STX16-NPEPL1H3BU86 382 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 K7EPI3 171 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 CBX4O00257 560 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 STAMBPO95630 424 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 FGF19O95750 216 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 NR2C2P49116 596 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ZNF177Q13360 481 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 LY6G5CQ5SRR4 150 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 TANGO2Q6ICL3 276 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 PID1Q7Z2X4 250 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 RNF135Q8IUD6 432 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 RPP25Q9BUL9 199 aaKnown RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 ANKRD60Q9BZ19 345 aa12.58□□□□□ -0.4
PRPF6-201ENST00000266079 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 IPO11Q9UI26 975 aaKnown RBP12.58□□□□□ -0.4
PRPF6-201ENST00000266079 CDC14AQ9UNH5 594 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms