RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Snx31Q6P8Y7 439 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Zfp438Q8BFX2 798 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nup54Q8BTS4 510 aaKnown RBP15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Snrnp48Q9D361 337 aa15.49■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam155bA2BDP1 471 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm17175E9Q528 179 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Kbtbd2G3X9X1 623 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gna12P27600 379 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Myl12aQ6ZWQ9 172 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Zfp57Q8C6P8 421 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rsph1Q8VIG3 301 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Wrnip1Q91XU0 660 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pcdhga10Q91XY9 930 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ppil6Q9D6D8 278 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mapk9Q9WTU6 423 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 2610028H24RikG5E8K1 270 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ptch2O35595 1182 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AlplP09242 524 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Serpinb5P70124 375 aaKnown RBP15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pacs2Q3V3Q7 862 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 KdsrQ6GV12 332 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cyp2r1Q6VVW9 501 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Eif2s1Q6ZWX6 315 aaKnown RBP15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dhx33Q80VY9 698 aaKnown RBP15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AW551984Q8BGF0 804 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fbxo30Q8BJL1 746 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Arhgap25Q8BYW1 648 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lrrc4Q99PH1 652 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Trappc5Q9CQA1 188 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tmed11Q9D2R4 215 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Efcab1Q9D3N2 212 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Q9D979 236 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ccdc86Q9JJ89 426 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pramef17A2ASJ1 475 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 JhyE9Q793 770 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 DldO08749 509 aaKnown RBP15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Htr5bP31387 370 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ptchd3Q0EEE2 906 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Elf3Q3UPW2 391 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr464Q5SW48 313 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nr1d2Q60674 576 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Vsx2Q61412 361 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Capn3Q64691 821 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Snx32Q80ZJ7 404 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mief1Q8BGV8 463 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Clec4a3Q8JZX6 237 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 NeproQ8R2U2 564 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Zfp811A0A0J9YU71 552 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pgbd1E9Q492 415 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 1600015I10RikE9Q745 711 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fbrsl1E9Q9T0 1031 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm3336J3QMQ6 198 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Pou1f1Q00286 291 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Smg8Q8VE18 991 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Barhl2Q8VIB5 384 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tchhl1Q9D3P1 638 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ribc2Q9D4Q1 309 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cyp3a41aQ9JMA7 504 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc23a1Q9Z2J0 605 aa15.48■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Klhl32A2AJX0 620 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Zfp963D3Z2T8 383 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc22a2O70577 553 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 SpnP15702 395 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Aqp4P55088 323 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ctnnb1Q02248 781 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc5a10Q5SWY8 596 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lcp2Q60787 533 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cfap206Q6PE87 622 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Npas4Q8BGD7 802 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rbm34Q8C5L7 375 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dmtf1Q8CE22 761 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc22a19Q8VCA0 551 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lgals12Q91VD1 314 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dnajc18Q9CZJ9 357 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dtwd1Q9D8U7 304 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc29a1Q9JIM1 460 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Skint11A7XV14 364 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Icam1P13597 537 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ccnb1P24860 430 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ndst2P52850 883 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Tapt1Q4VBD2 564 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Trim24Q64127 1051 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Arhgap12Q8C0D4 838 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ipo13Q8K0C1 963 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr1302Q8VGE9 315 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Trbv4A0A075B5I2 113 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ccnb1ip1D3Z3K2 276 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ptar1E9QAB6 424 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam181aJ3QNB7 292 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Lire1P11260 357 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Npr1P18293 1057 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 SagP20443 403 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Elk4P41158 430 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Btbd3P58545 530 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Eml1Q05BC3 814 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Itga3Q62470 1053 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 VclQ64727 1066 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ubp1Q811S7 540 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Klhl12Q8BZM0 568 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr1467Q8VFW1 308 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms