RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Vmn2r116E9Q6I0 856 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp788E9Q980 884 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 F6Y6L6 278 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sult3a1O35403 293 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pja1O55176 578 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tk1P04184 233 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PfklP12382 780 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rab17P35292 214 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tac1P41539 130 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Htr4P97288 388 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbtb14Q08376 449 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbtb48Q1H9T6 681 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 InscQ3HNM7 579 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pgap2Q3TQR0 254 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Grm5Q3UVX5 1203 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Eef2kmtQ3UZW7 335 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nuak1Q641K5 658 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ripor1Q68FE6 1223 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr320Q7TRZ4 306 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfyve1Q810J8 777 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ap5m1Q8BJ63 490 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sphk1Q8CI15 382 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Wdr74Q8VCG3 384 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr1176Q8VG40 315 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr459Q924H8 314 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zdhhc6Q9CPV7 413 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Trap1Q9CQN1 706 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Lrrc17Q9CXD9 443 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cdyl2Q9D5D8 503 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kifc1Q9QWT9 674 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Adam24Q9R160 761 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ep300B2RWS6 2412 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rp1l1Q8CGM2 1859 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr1049A2ARZ0 308 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rsrc2A2RTL5 376 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp94E9Q6Y4 486 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pabpc4lG5E8X2 370 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 H2-M9O19442 342 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Top3aO70157 1003 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 AurkcO88445 282 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccnd1P25322 295 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Sult1e1P49891 295 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kpnb1P70168 876 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tbx1P70323 479 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cul4aQ3TCH7 759 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 PnocQ64387 187 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gabbr2Q80T41 940 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Xylt1Q811B1 953 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hus1Q8BQY8 280 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Arhgap12Q8C0D4 838 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmem120aQ8C1E7 343 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pcdhb7Q8CDY9 829 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 H6pdQ8CFX1 789 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Apbb3Q8R1C9 486 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Klrb1fQ8VD98 217 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Caskin2Q8VHK1 1201 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Senp2Q91ZX6 588 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Eif2b2Q99LD9 351 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Nsmce3Q9CPR8 279 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zbed5B2RPU8 756 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm5415E9PXF3 478 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 E9Q0B3 247 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pex5O09012 639 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Kpna3O35344 521 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fgf10O35565 209 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Igf2bp1O88477 577 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fpr-rs3O88537 343 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mthfd2P18155 350 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 F3P20352 294 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pdha2P35487 391 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rpl22P67984 128 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 D17Wsu92eQ3TT38 291 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Orc2Q60862 576 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Xlr3cQ61806 226 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MafkQ61827 156 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Fam149b1Q6NSV7 578 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ahcyl1Q80SW1 530 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tecpr1Q80VP0 1166 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp446Q8C9M8 523 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 ThtpaQ8JZL3 224 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Pglyrp2Q8VCS0 530 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Olfr371Q8VGB8 312 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 MtapQ9CQ65 283 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gid8Q9D7M1 228 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ddi1Q9DAF3 408 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ifi30Q9ESY9 248 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Ccdc22Q9JIG7 627 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Cdc7Q9Z0H0 564 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 SvilQ8K4L3 2170 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm3173A6NAS3 172 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm3020E9Q3J7 150 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm2237E9Q501 211 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Zfp846G3X996 541 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Gm3591K7N6X2 186 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Rps6ka3P18654 740 aaKnown RBP6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Hoxd12P23812 268 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 S100a9P31725 113 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Tmem120bQ3TA38 339 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Prmt9Q3U3W5 846 aa6.87□□□□□ -1.31
Bdnf-201ENSMUST00000053317 Mylk4Q5SUV5 386 aa6.87□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms